RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 POLR2BP30876 1174 aaKnown RBP16.34■□□□□ 0.21
TGFB1-202ENST00000597453 ME1P48163 572 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 NUCB2P80303 420 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 CYP4F8P98187 520 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 TFAMQ00059 246 aaKnown RBP16.34■□□□□ 0.21
TGFB1-202ENST00000597453 FCHO2Q0JRZ9 810 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 MTAPQ13126 283 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 MGAT5BQ3V5L5 792 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 SV2CQ496J9 727 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 SHC4Q6S5L8 630 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 ITIH5Q86UX2 942 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 ARID3BQ8IVW6 561 aaPredicted RBP16.34■□□□□ 0.21
TGFB1-202ENST00000597453 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 SUMF1Q8NBK3 374 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 FAM200AQ8TCP9 573 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 FAM3CQ92520 227 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 ATXN3LQ9H3M9 355 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 IL21Q9HBE4 155 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 PANK4Q9NVE7 773 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 TMLHEQ9NVH6 421 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 RBAKQ9NYW8 714 aaPredicted RBP16.34■□□□□ 0.21
TGFB1-202ENST00000597453 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 CACNA1AO00555 2505 aa16.34■□□□□ 0.21
TGFB1-202ENST00000597453 ZNF638Q14966 1978 aaKnown RBP16.33■□□□□ 0.21
TGFB1-202ENST00000597453 PRPF6O94906 941 aaKnown RBP16.33■□□□□ 0.2
TGFB1-202ENST00000597453 PRAMEF12O95522 483 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 ITGB3P05106 788 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 GARTP22102 1010 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 TUFMP49411 452 aaKnown RBP16.33■□□□□ 0.2
TGFB1-202ENST00000597453 GPR158Q5T848 1215 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 YAF2Q8IY57 180 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 SYCP3Q8IZU3 236 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 DCLK2Q8N568 766 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 CXorf38Q8TB03 319 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 GIPC2Q8TF65 315 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 LEO1Q8WVC0 666 aaPredicted RBP16.33■□□□□ 0.2
TGFB1-202ENST00000597453 NELL1Q92832 810 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 E2F7Q96AV8 911 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 ZNF560Q96MR9 790 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 PRMT8Q9NR22 394 aaPredicted RBP16.33■□□□□ 0.2
TGFB1-202ENST00000597453 ABI2Q9NYB9 513 aaPredicted RBP16.33■□□□□ 0.2
TGFB1-202ENST00000597453 PCDHA7Q9UN72 937 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 AGAP1Q9UPQ3 857 aa16.33■□□□□ 0.2
TGFB1-202ENST00000597453 CHADO15335 359 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 KINO60870 393 aaKnown RBP16.32■□□□□ 0.2
TGFB1-202ENST00000597453 HAPLN1P10915 354 aaPredicted RBP16.32■□□□□ 0.2
TGFB1-202ENST00000597453 CCNE1P24864 410 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 SOX9P48436 509 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 ALCAMQ13740 583 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 VEPH1Q14D04 833 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 E2F4Q16254 413 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 ZBTB44Q8NCP5 570 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 SPPL2BQ8TCT7 592 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
TGFB1-202ENST00000597453 C2orf15Q8WU43 125 aaKnown RBP16.32■□□□□ 0.2
TGFB1-202ENST00000597453 ZFYVE19Q96K21 471 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 SMG9Q9H0W8 520 aaKnown RBP16.32■□□□□ 0.2
TGFB1-202ENST00000597453 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 LMAN1LQ9HAT1 526 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 PCDHGA2Q9Y5H1 932 aa16.32■□□□□ 0.2
TGFB1-202ENST00000597453 PTPRJQ12913 1337 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 SLC38A8A6NNN8 435 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 EXTL3O43909 919 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 FGF19O95750 216 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
TGFB1-202ENST00000597453 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
TGFB1-202ENST00000597453 PNPLA4P41247 253 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 ID4P47928 161 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 GPR15P49685 360 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 SMARCB1Q12824 385 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 BFSP1Q12934 665 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 ARHGAP15Q53QZ3 475 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 CCDC65Q8IXS2 484 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 KIAA2013Q8IYS2 634 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 STKLD1Q8NE28 680 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 TTC8Q8TAM2 541 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 CSGALNACT1Q8TDX6 532 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 RUBCNQ92622 972 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 CHAMP1Q96JM3 812 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 HINFPQ9BQA5 517 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 MTMR12Q9C0I1 747 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 SCAND2PQ9GZW5 306 aaPredicted RBP16.31■□□□□ 0.2
TGFB1-202ENST00000597453 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 TASP1Q9H6P5 420 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 TMEM206Q9H813 350 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 ZSCAN32Q9NX65 697 aa16.31■□□□□ 0.2
TGFB1-202ENST00000597453 LILRB5O75023 590 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 CHRNB1P11230 501 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 TDGF1P13385 188 aa16.3■□□□□ 0.2
TGFB1-202ENST00000597453 HMGA1P17096 107 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms