RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ASB7Q9H672 318 aa11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 THG1LQ9NWX6 298 aaKnown RBP11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 DPP3Q9NY33 737 aa11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 DERAQ9Y315 318 aa11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 TPRP12270 2363 aaKnown RBP11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 DMXL1Q9Y485 3027 aa11.42□□□□□ -0.58
CHMP2A-202ENST00000596708 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 MYO18AQ92614 2054 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 ANO9A1A5B4 782 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 TISP43B9A030 160 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 BMP15O95972 392 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 CNR2P34972 360 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 LONP1P36776 959 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 GRIN1Q05586 938 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 TNK2Q07912 1038 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 PTPAQ15257 358 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 DCP1BQ8IZD4 617 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 KRI1Q8N9T8 703 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 SPPL2BQ8TCT7 592 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 FIZ1Q96SL8 496 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 SMG9Q9H0W8 520 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 ABI2Q9NYB9 513 aaPredicted RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 C2CD2Q9Y426 696 aa11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 HELZP42694 1942 aaKnown RBP11.41□□□□□ -0.58
CHMP2A-202ENST00000596708 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 K7ESF4 209 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 LRP3O75074 770 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 HAPLN1P10915 354 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 ATF6P18850 670 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 WEE1P30291 646 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 DDIT3P35638 169 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 MCM2P49736 904 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SMARCB1Q12824 385 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 POSTNQ15063 836 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 ITPRIPL2Q3MIP1 535 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SV2CQ496J9 727 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 WSCD1Q658N2 575 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 LRRTM3Q86VH5 581 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 ABCA7Q8IZY2 2146 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SYNPOQ8N3V7 929 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 MAB21L3Q8N8X9 362 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 NETO1Q8TDF5 533 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 POMGNT1Q8WZA1 660 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 CNTNAP3BQ96NU0 1288 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SLC46A2Q9BY10 475 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 CNTNAP3Q9BZ76 1288 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 IL21Q9HBE4 155 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 GKN1Q9NS71 199 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 SEMA4GQ9NTN9 838 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 C2orf42Q9NWW7 574 aa11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 MAGED2Q9UNF1 606 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
CHMP2A-202ENST00000596708 KIAA1549LQ6ZVL6 1849 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 KPNA7A9QM74 516 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PRPF40AO75400 957 aaKnown RBP11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PAPSS2O95340 614 aaPredicted RBP11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 CD2BP2O95400 341 aaKnown RBP11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 AVPR1AP37288 418 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 TSPY1Q01534 308 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 BFSP1Q12934 665 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 CCINQ13939 588 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PRR23CQ6ZRP0 262 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 ZNF720Q7Z2F6 126 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 BRAPQ7Z569 592 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 CMTM8Q8IZV2 173 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PI4K2AQ9BTU6 479 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 CCSER1Q9C0I3 900 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 CCDC39Q9UFE4 941 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 ZMYM5Q9UJ78 669 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 EXOC7Q9UPT5 735 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PCDHB5Q9Y5E4 795 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 STYXL1Q9Y6J8 313 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 PTPRDP23468 1912 aa11.39□□□□□ -0.59
CHMP2A-202ENST00000596708 SLC30A4O14863 429 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 AXIN1O15169 862 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 IL18RAPO95256 599 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 F11P03951 625 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 KCNA4P22459 653 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 DDX6P26196 483 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 HOXC13P31276 330 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 GPR15P49685 360 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 TFAMQ00059 246 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 AMPD2Q01433 879 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 POU5F1Q01860 360 aaKnown RBP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 GRSF1Q12849 480 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 RUNX3Q13761 415 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 CSRP2Q16527 193 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 TRIM68Q6AZZ1 485 aa11.38□□□□□ -0.59
CHMP2A-202ENST00000596708 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms