RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 DUSP4Q13115 394 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 PLD1Q13393 1074 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 INTS6LQ5JSJ4 861 aaKnown RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 SCARA5Q6ZMJ2 495 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 LIMS2Q7Z4I7 341 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 GRASPQ7Z6J2 395 aaPredicted RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 FRMD5Q7Z6J6 570 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 TDRD5Q8NAT2 981 aaKnown RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 ATAD1Q8NBU5 361 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 C2orf15Q8WU43 125 aaKnown RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 KBTBD7Q8WVZ9 684 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 VRTNQ9H8Y1 702 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
IRF3-211ENST00000596644 RWDD2AQ9UIY3 292 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 YIPF1Q9Y548 306 aa16.05■□□□□ 0.16
IRF3-211ENST00000596644 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 LOC730098B7Z3J9 87 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 GABRDO14764 452 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 HCRTO43612 131 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 TACC1O75410 805 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 VNN2O95498 520 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 GNA14O95837 355 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 CDR1P51861 262 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 MCCD1P59942 119 aaPredicted RBP16.04■□□□□ 0.16
IRF3-211ENST00000596644 NFE2Q16621 373 aaPredicted RBP16.04■□□□□ 0.16
IRF3-211ENST00000596644 DPCR1Q3MIW9 517 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 LRRTM3Q86VH5 581 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 SPPL2BQ8TCT7 592 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 ELMO3Q96BJ8 720 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 SEPT5Q99719 369 aaPredicted RBP16.04■□□□□ 0.16
IRF3-211ENST00000596644 SYT15Q9BQS2 421 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 SRRTQ9BXP5 876 aaKnown RBP16.04■□□□□ 0.16
IRF3-211ENST00000596644 SMYD3Q9H7B4 428 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.04■□□□□ 0.16
IRF3-211ENST00000596644 ABI2Q9NYB9 513 aaPredicted RBP16.04■□□□□ 0.16
IRF3-211ENST00000596644 SLC27A5Q9Y2P5 690 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 PCDHB5Q9Y5E4 795 aa16.04■□□□□ 0.16
IRF3-211ENST00000596644 C2CD4DB7Z1M9 353 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 ASS1P00966 412 aaKnown RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 PDGFRBP09619 1106 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 FAM163BP0C2L3 166 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 FSHRP23945 695 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 GBP2P32456 591 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 GNL1P36915 607 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 ALDH1A3P47895 512 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 EPHB3P54753 998 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 TPD52L1Q16890 204 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 MGAT5BQ3V5L5 792 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 PABPC1LQ4VXU2 614 aaKnown RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 IQCEQ6IPM2 695 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 SPOPLQ6IQ16 392 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 GET4Q7L5D6 327 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 FBXL13Q8NEE6 735 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 SLC35C1Q96A29 364 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 ZNF512Q96ME7 567 aaPredicted RBP16.03■□□□□ 0.16
IRF3-211ENST00000596644 PI4K2AQ9BTU6 479 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 CRISPLD1Q9H336 500 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 CD320Q9NPF0 282 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 HCFC1R1Q9NWW0 138 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 HSFX1Q9UBD0 423 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 CDH9Q9ULB4 789 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 USTQ9Y2C2 406 aa16.03■□□□□ 0.16
IRF3-211ENST00000596644 A8MXQ7 604 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 CCDC192P0DO97 292 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 PTPN2P17706 415 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 LMO2P25791 158 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 RAP1GAPP47736 663 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 TUFMP49411 452 aaKnown RBP16.02■□□□□ 0.16
IRF3-211ENST00000596644 NTHL1P78549 312 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 CCDC183Q5T5S1 534 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 SPATA2LQ8IUW3 424 aaPredicted RBP16.02■□□□□ 0.16
IRF3-211ENST00000596644 TTC9BQ8N6N2 239 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 TMLHEQ9NVH6 421 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 DNMT3BQ9UBC3 853 aaKnown RBP16.02■□□□□ 0.16
IRF3-211ENST00000596644 GTF3C4Q9UKN8 822 aa16.02■□□□□ 0.16
IRF3-211ENST00000596644 DOCK6Q96HP0 2047 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 N4BP1O75113 896 aaKnown RBP16.01■□□□□ 0.15
IRF3-211ENST00000596644 ATP2C2O75185 946 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 SOAT2O75908 522 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 RHOP08100 348 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 HAPLN1P10915 354 aaPredicted RBP16.01■□□□□ 0.15
IRF3-211ENST00000596644 CDH8P55286 799 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 VEPH1Q14D04 833 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 MAPRE1Q15691 268 aaKnown RBP16.01■□□□□ 0.15
IRF3-211ENST00000596644 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 WDR44Q5JSH3 913 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
IRF3-211ENST00000596644 SASS6Q6UVJ0 657 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms