RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ZCWPW1Q9H0M4 648 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 TMEM8AQ9HCN3 771 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 CD320Q9NPF0 282 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 ZDHHC7Q9NXF8 308 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 ARMCX3Q9UH62 379 aaPredicted RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
LIG1-211ENST00000596457 XIRP2A4UGR9 3374 aa11.88□□□□□ -0.51
LIG1-211ENST00000596457 WDFY4Q6ZS81 3184 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 MTMR11A4FU01 709 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 XYLBO75191 536 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 SOAT2O75908 522 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 C1RP00736 705 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 LMO2P25791 158 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 LHX1P48742 406 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 NTHL1P78549 312 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 TWF1Q12792 350 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 UVSSAQ2YD98 709 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 DPCR1Q3MIW9 517 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 MGAT5BQ3V5L5 792 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 CCDC183Q5T5S1 534 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 KRT39Q6A163 491 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 SASS6Q6UVJ0 657 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 DPH6Q7L8W6 267 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 LRRTM3Q86VH5 581 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 ATAD1Q8NBU5 361 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 CCDC150Q8NCX0 1101 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 FAM200AQ8TCP9 573 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 TAS1R2Q8TE23 839 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 ZNF707Q96C28 371 aaPredicted RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 NECTIN4Q96NY8 510 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 IMPG2Q9BZV3 1241 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 SMYD3Q9H7B4 428 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 METTL14Q9HCE5 456 aaKnown RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 TMLHEQ9NVH6 421 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 HCFC1R1Q9NWW0 138 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
LIG1-211ENST00000596457 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 RWDD2AQ9UIY3 292 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 INSL5Q9Y5Q6 135 aa11.87□□□□□ -0.51
LIG1-211ENST00000596457 A8MXQ7 604 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 DCXO43602 365 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 ATP2C2O75185 946 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 LRRN2O75325 713 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 VNN2O95498 520 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 HNRNPA1P09651 372 aaKnown RBP eCLIP11.86□□□□□ -0.51
LIG1-211ENST00000596457 P4HA1P13674 534 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 WARSP23381 471 aaKnown RBP11.86□□□□□ -0.51
LIG1-211ENST00000596457 GBP2P32456 591 aaPredicted RBP11.86□□□□□ -0.51
LIG1-211ENST00000596457 ALDH1A3P47895 512 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 MXI1P50539 228 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 FOXK2Q01167 660 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 HSP90AA4PQ58FG1 418 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 CAVIN1Q6NZI2 390 aaKnown RBP11.86□□□□□ -0.51
LIG1-211ENST00000596457 C15orf39Q6ZRI6 1047 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 TCEAL8Q8IYN2 117 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 ELMOD1Q8N336 334 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 TTC9BQ8N6N2 239 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 CMASQ8NFW8 434 aaPredicted RBP11.86□□□□□ -0.51
LIG1-211ENST00000596457 KBTBD7Q8WVZ9 684 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.51
LIG1-211ENST00000596457 ZNF512Q96ME7 567 aaPredicted RBP11.86□□□□□ -0.51
LIG1-211ENST00000596457 LPIN3Q9BQK8 851 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 ACBD6Q9BR61 282 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 XYLT2Q9H1B5 865 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 CRISPLD1Q9H336 500 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 NR2E1Q9Y466 385 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 PCDHB5Q9Y5E4 795 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 ZDBF2Q9HCK1 2354 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 CFAP54Q96N23 3096 aa11.86□□□□□ -0.51
LIG1-211ENST00000596457 DENND4AQ7Z401 1863 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 MYBPHLA2RUH7 354 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 GABRDO14764 452 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 STAU1O95793 577 aaKnown RBP11.85□□□□□ -0.51
LIG1-211ENST00000596457 GNA14O95837 355 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 CCDC192P0DO97 292 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 PTPN2P17706 415 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 PCSK1P29120 753 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 GTF2H1P32780 548 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
LIG1-211ENST00000596457 CYP27A1Q02318 531 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 ENPEPQ07075 957 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 LRMPQ12912 555 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 CCDC142Q17RM4 750 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 INTS6LQ5JSJ4 861 aaKnown RBP11.85□□□□□ -0.51
LIG1-211ENST00000596457 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
LIG1-211ENST00000596457 GET4Q7L5D6 327 aaPredicted RBP11.85□□□□□ -0.51
LIG1-211ENST00000596457 SPATA2LQ8IUW3 424 aaPredicted RBP11.85□□□□□ -0.51
LIG1-211ENST00000596457 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms