RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SDCBP2Q9H190 292 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 SNX25Q9H3E2 840 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 CBX8Q9HC52 389 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 PRDM6Q9NQX0 595 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 MAN1C1Q9NR34 630 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 FBXW11Q9UKB1 542 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 COG5Q9UP83 839 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 NME7Q9Y5B8 376 aa20.66■□□□□ 0.9
PNKP-207ENST00000596014 BECN2A8MW95 431 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 WEE2P0C1S8 567 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 KRT31Q15323 416 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 LRRTM3Q86VH5 581 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 HDAC7Q8WUI4 952 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
PNKP-207ENST00000596014 FAXDC2Q96IV6 333 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 PLEKHA4Q9H4M7 779 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 DPP7Q9UHL4 492 aa20.65■□□□□ 0.9
PNKP-207ENST00000596014 PDGFRBP09619 1106 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 ATF2P15336 505 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 CDK11BP21127 795 aaKnown RBP20.64■□□□□ 0.9
PNKP-207ENST00000596014 KCNA5P22460 613 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 PCSK1P29120 753 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 TSPY1Q01534 308 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 LRMPQ12912 555 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 ANKRD54Q6NXT1 300 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 RNF19BQ6ZMZ0 732 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 CRACR2AQ9BSW2 395 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 CYP3A43Q9HB55 503 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 TAB2Q9NYJ8 693 aa20.64■□□□□ 0.9
PNKP-207ENST00000596014 LIMA1Q9UHB6 759 aaKnown RBP20.64■□□□□ 0.9
PNKP-207ENST00000596014 AFF4Q9UHB7 1163 aaKnown RBP20.64■□□□□ 0.9
PNKP-207ENST00000596014 GTPBP10A4D1E9 387 aaKnown RBP20.64■□□□□ 0.89
PNKP-207ENST00000596014 MSLNLQ96KJ4 702 aa20.64■□□□□ 0.89
PNKP-207ENST00000596014 PGLYRP2Q96PD5 576 aa20.64■□□□□ 0.89
PNKP-207ENST00000596014 VPS16Q9H269 839 aa20.64■□□□□ 0.89
PNKP-207ENST00000596014 DZANK1Q9NVP4 752 aa20.64■□□□□ 0.89
PNKP-207ENST00000596014 GCNT4Q9P109 453 aa20.64■□□□□ 0.89
PNKP-207ENST00000596014 LRRC10BA6NIK2 292 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 A8MXQ7 604 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 H3BQ06 376 aaPredicted RBP20.63■□□□□ 0.89
PNKP-207ENST00000596014 VNN2O95498 520 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 ATP1A3P13637 1013 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 ADCY1Q08828 1119 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 SLC39A12Q504Y0 691 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 INTS6LQ5JSJ4 861 aaKnown RBP20.63■□□□□ 0.89
PNKP-207ENST00000596014 SYCE2Q6PIF2 218 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 ELMSAN1Q6PJG2 1045 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 GBP6Q6ZN66 633 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 DCP1BQ8IZD4 617 aaKnown RBP20.63■□□□□ 0.89
PNKP-207ENST00000596014 ANKRD20A12PQ8NF67 263 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 NT5C1BQ96P26 610 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 PKMYT1Q99640 499 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 INTS2Q9H0H0 1204 aaKnown RBP20.63■□□□□ 0.89
PNKP-207ENST00000596014 CDH9Q9ULB4 789 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 UNC80Q8N2C7 3258 aa20.63■□□□□ 0.89
PNKP-207ENST00000596014 C5orf42Q9H799 3197 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 PES1O00541 588 aaKnown RBP20.62■□□□□ 0.89
PNKP-207ENST00000596014 ATP2C2O75185 946 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 SEC24AO95486 1093 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 HOXB8P17481 243 aaPredicted RBP20.62■□□□□ 0.89
PNKP-207ENST00000596014 ELF1P32519 619 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 LUZP1Q86V48 1076 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 TCEAL8Q8IYN2 117 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 C12orf76Q8N812 135 aaPredicted RBP20.62■□□□□ 0.89
PNKP-207ENST00000596014 RNF214Q8ND24 703 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 PPP1R9BQ96SB3 815 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 ARID3AQ99856 593 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 SYT15Q9BQS2 421 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 CYP4F11Q9HBI6 524 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 TMLHEQ9NVH6 421 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 GTF3C4Q9UKN8 822 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 MAFFQ9ULX9 164 aa20.62■□□□□ 0.89
PNKP-207ENST00000596014 MYBPHLA2RUH7 354 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 MTMR11A4FU01 709 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 SPDYE4A6NLX3 237 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 TPM2P07951 284 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 SLC9A1P19634 815 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CDR1P51861 262 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 COPB1P53618 953 aaKnown RBP20.61■□□□□ 0.89
PNKP-207ENST00000596014 PSMC1P62191 440 aaKnown RBP20.61■□□□□ 0.89
PNKP-207ENST00000596014 INCA1Q0VD86 236 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 SMARCB1Q12824 385 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CUL2Q13617 745 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 EXOC3L4Q17RC7 722 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 UVSSAQ2YD98 709 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 LIN9Q5TKA1 542 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 FAM171BQ6P995 826 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 APTXQ7Z2E3 356 aaKnown RBP20.61■□□□□ 0.89
PNKP-207ENST00000596014 ATAD1Q8NBU5 361 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 FAM200AQ8TCP9 573 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CRTAC1Q9NQ79 661 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 PRRG1O14668 218 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 RFPL2O75678 378 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 ZMYND10O75800 440 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 C8AP07357 584 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 CD58P19256 250 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 NDST1P52848 882 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 TFF2Q03403 129 aa20.61■□□□□ 0.89
PNKP-207ENST00000596014 DUSP4Q13115 394 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms