RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 ACOT2P49753 483 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 LIG4P49917 911 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 FKBP1AP62942 108 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 SARNPP82979 210 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 CUL2Q13617 745 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 THEMIS2Q5TEJ8 643 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 DSTYKQ6XUX3 929 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 SPOCD1Q6ZMY3 1216 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 MCF2L2Q86YR7 1114 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 SCYL3Q8IZE3 742 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 TSC22D3Q99576 134 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 CADM1Q9BY67 442 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 MANSC1Q9H8J5 431 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 F8VP50 259 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 DYNLT1P63172 113 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 RCN1Q15293 331 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 WDR72Q3MJ13 1102 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 SPDYAQ5MJ70 313 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 TDRD10Q5VZ19 366 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 DRICH1Q6PGQ1 229 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 PHF13Q86YI8 300 aaPredicted RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 PAFAH2Q99487 392 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 NMRK1Q9NWW6 199 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 GARTP22102 1010 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 GLRA2P23416 452 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 GPX6P59796 221 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 C1QBPQ07021 282 aaKnown RBP18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZACNQ401N2 412 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 RHPN2Q8IUC4 686 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 ATP11CQ8NB49 1132 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZNF398Q8TD17 642 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 MCEEQ96PE7 176 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 BTBD10Q9BSF8 475 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 NUMBLQ9Y6R0 609 aa18.3■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZNFX1Q9P2E3 1918 aaKnown RBP18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 ZNF536O15090 1300 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 VHLP40337 213 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 PALM2Q8IXS6 379 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SPIRE2Q8WWL2 714 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 TAAR1Q96RJ0 339 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SH3GL3Q99963 347 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 PCDH9Q9HC56 1237 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 RABGEF1Q9UJ41 708 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 AGTPBP1Q9UPW5 1226 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 DRG1Q9Y295 367 aaKnown RBP18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SFNP31947 248 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 ARFIP2P53365 341 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 ARL4CP56559 192 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 GAD2Q05329 585 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 MCL1Q07820 350 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 CTC1Q2NKJ3 1217 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 TFDP3Q5H9I0 405 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SNX30Q5VWJ9 437 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 STMN2Q93045 179 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SYT15Q9BQS2 421 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 NTPCRQ9BSD7 190 aaKnown RBP18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 TSSK1BQ9BXA7 367 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 TLE6Q9H808 572 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 ARL8BQ9NVJ2 186 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 DLGAP2Q9P1A6 1054 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SLC17A7Q9P2U7 560 aa18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 SAE1Q9UBE0 346 aaPredicted RBP18.29■□□□□ 0.52
ARHGEF1-213ENST00000595897 LOXHD1Q8IVV2 1947 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 NDC80O14777 642 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 ACO1P21399 889 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 CAP2P40123 477 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 TUBP50607 506 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 KRT76Q01546 638 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 SP4Q02446 784 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 LRRC6Q86X45 466 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 SYTL5Q8TDW5 730 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 VCXQ9H320 206 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 C10orf88Q9H8K7 445 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 METTL5Q9NRN9 209 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 EXTL3O43909 919 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 PLA2G6O60733 806 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 SERPINB3P29508 390 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 PSMC4P43686 418 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 KPNB1Q14974 876 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 RASA2Q15283 850 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 OASLQ15646 514 aaKnown RBP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 TXNRD3NBQ6F5E7 133 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 DNAJC24Q6P3W2 148 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 CCDC62Q6P9F0 684 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 CLEC4DQ8WXI8 215 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 TUBB6Q9BUF5 446 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 CLUHO75153 1309 aa18.28■□□□□ 0.52
ARHGEF1-213ENST00000595897 CAPN9O14815 690 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 KLHL38Q2WGJ6 581 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 BBS9Q3SYG4 887 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 SLC30A9Q6PML9 568 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 DTX3LQ8TDB6 740 aa18.27■□□□□ 0.52
ARHGEF1-213ENST00000595897 NSL1Q96IY1 281 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms