RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 EPHA5P54756 1037 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 UBE2HP62256 183 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ADAM9Q13443 819 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 HTR4Q13639 388 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 EDRF1Q3B7T1 1238 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ZACNQ401N2 412 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 TMEM31Q5JXX7 168 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ISM2Q6H9L7 571 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 DPH6Q7L8W6 267 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 NPAS3Q8IXF0 933 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ZC3H3Q8IXZ2 948 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 THEM5Q8N1Q8 247 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 TMEM86AQ8N2M4 240 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 SPATA18Q8TC71 538 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ING5Q8WYH8 240 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 TCEAL4Q96EI5 215 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ASIC4Q96FT7 647 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 ACBD6Q9BR61 282 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 DDX43Q9NXZ2 648 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 HSFX1Q9UBD0 423 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 CDH7Q9ULB5 785 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 FRMD4BQ9Y2L6 1034 aa11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-206ENST00000595523 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 TICRRQ7Z2Z1 1910 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 ATP2C2O75185 946 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 TRIM49P0CI25 452 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 TRIM49CP0CI26 452 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 CEBPBP17676 345 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 WARSP23381 471 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 LMO2P25791 158 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 VAMP7P51809 220 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 AP3M2P53677 418 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 PPP3CAQ08209 521 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 BIRC3Q13489 604 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 WDR72Q3MJ13 1102 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 ANKRD40Q6AI12 368 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 SV2AQ7L0J3 742 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 TMC8Q8IU68 726 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 FAM186BQ8IYM0 893 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 FGF14Q92915 247 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 LPIN3Q9BQK8 851 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 MRPL45Q9BRJ2 306 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 VRTNQ9H8Y1 702 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 HOOK1Q9UJC3 728 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
SHKBP1-206ENST00000595523 MYO16Q9Y6X6 1858 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 F5P12259 2224 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MYBPHLA2RUH7 354 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PRR33A8MZF0 331 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 IKBKBO14920 756 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 NARSO43776 548 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 TACC1O75410 805 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 HAPLN1P10915 354 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 RPL13P26373 211 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 ATICP31939 592 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PSMC2P35998 433 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 LHX1P48742 406 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PSMC1P62191 440 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MYL7Q01449 175 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 TSPY1Q01534 308 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SMARCB1Q12824 385 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 TRPC3Q13507 836 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 NCOA4Q13772 614 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MORC3Q14149 939 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 FAM171BQ6P995 826 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 HFE2Q6ZVN8 426 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 INTS8Q75QN2 995 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 DCP1BQ8IZD4 617 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SPPL2BQ8TCT7 592 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 C2orf15Q8WU43 125 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 PSMG2Q969U7 264 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF512Q96ME7 567 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MMS19Q96T76 1030 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SEPT5Q99719 369 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 RPP25Q9BUL9 199 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SDCBP2Q9H190 292 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 CRTAC1Q9NQ79 661 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 ABI2Q9NYB9 513 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 GTF3C4Q9UKN8 822 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 R3HCC1Q9Y3T6 440 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 ZFP37Q9Y6Q3 630 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 NUMBLQ9Y6R0 609 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 MIA3Q5JRA6 1907 aa11.77□□□□□ -0.53
SHKBP1-206ENST00000595523 WDR87Q6ZQQ6 2873 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms