RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ATP11CQ8NB49 1132 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 GLIS1Q8NBF1 620 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 SLC35B2Q8TB61 432 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 MICAL1Q8TDZ2 1067 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 LPAR1Q92633 364 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 GPRASP2Q96D09 838 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 BICD1Q96G01 975 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 CEP170P1Q96L14 293 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 KIF9Q9HAQ2 790 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 SLC38A10Q9HBR0 1119 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
VRK3-209ENST00000594948 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 TGDSO95455 350 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 TNNI1P19237 187 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 EIF2AK2P19525 551 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 LIG4P49917 911 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 ARL4CP56559 192 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 PDIA2Q13087 525 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 FASTKD3Q14CZ7 662 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 HIF1AQ16665 826 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 SGSM1Q2NKQ1 1148 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 TAF1BQ53T94 588 aaPredicted RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 FAM91A1Q658Y4 838 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 UBR7Q8N806 425 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 TTC13Q8NBP0 860 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 MZB1Q8WU39 189 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 MAK16Q9BXY0 300 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 ZNF518BQ9C0D4 1074 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 ACSS3Q9H6R3 686 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 SNCAIPQ9Y6H5 919 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 A0A1W2PPM1 405 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 HGSO14964 777 aaPredicted RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 CCDC22O60826 627 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CFHP08603 1231 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 ZSCAN5DPP0CG00 497 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 KRT10P13645 584 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 ATF7P17544 494 aaPredicted RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 EPHB2P29323 1055 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 GJC1P36383 396 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CDKN2BP42772 138 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 GPX6P59796 221 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 CBLBQ13191 982 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 C2CD6Q53TS8 623 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 PPP1R15BQ5SWA1 713 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 TMEM270Q6UE05 265 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 POLNQ7Z5Q5 900 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CLNKQ7Z7G1 428 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 FAM83AQ86UY5 434 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 CHSY1Q86X52 802 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 ZNF276Q8N554 614 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 FLAD1Q8NFF5 587 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 OSBPL1AQ9BXW6 950 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 APOBEC3GQ9HC16 384 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 XPNPEP1Q9NQW7 623 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 STOML1Q9UBI4 398 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 AGO2Q9UKV8 859 aaKnown RBP13.94□□□□□ -0.18
VRK3-209ENST00000594948 CLUHO75153 1309 aa13.94□□□□□ -0.18
VRK3-209ENST00000594948 GM2AP17900 193 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 SATB1Q01826 763 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 ZNF252P-AS1Q0IIN9 211 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 DLGAP5Q15398 846 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 WDR72Q3MJ13 1102 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 PASD1Q8IV76 773 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 ELMO3Q96BJ8 720 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 RMDN3Q96TC7 470 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 MMADHCQ9H3L0 296 aaPredicted RBP13.93□□□□□ -0.18
VRK3-209ENST00000594948 DENND2DQ9H6A0 471 aaPredicted RBP13.93□□□□□ -0.18
VRK3-209ENST00000594948 GABBR1Q9UBS5 961 aa13.93□□□□□ -0.18
VRK3-209ENST00000594948 YDJCA8MPS7 323 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 H0YIN7 160 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ZNF862O60290 1169 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 FAM155BO75949 473 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CBX6O95503 412 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PSAPP07602 524 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 MMP10P09238 476 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 MYCLP12524 364 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 KRT4P19013 534 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 GLRA2P23416 452 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CCND2P30279 289 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CDH5P33151 784 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 AP3M2P53677 418 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 KRT72Q14CN4 511 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 SEPT7Q16181 437 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 MAPK6Q16659 721 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 KAZNQ674X7 775 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ANO7Q6IWH7 933 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 DNAJC24Q6P3W2 148 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ZNF449Q6P9G9 518 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 RSBN1LQ6PCB5 846 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms