RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 RETP07949 1114 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 TGM1P22735 817 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 CDC25CP30307 473 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 TUFMP49411 452 aaKnown RBP15.93■□□□□ 0.14
PNKP-202ENST00000593706 ACOT2P49753 483 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 ZNF131P52739 623 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 PLCB2Q00722 1185 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 DMWDQ09019 674 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 ADALQ6DHV7 355 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 SLC39A4Q6P5W5 647 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 TXNDC11Q6PKC3 985 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 LONP2Q86WA8 852 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 BPIFB1Q8TDL5 484 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 KCNN1Q92952 543 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 MKNK1Q9BUB5 465 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 FOXD4L1Q9NU39 408 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 OBP2AQ9NY56 170 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 DSEQ9UL01 958 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 DERAQ9Y315 318 aa15.93■□□□□ 0.14
PNKP-202ENST00000593706 STX6O43752 255 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 PAPSS2O95340 614 aaPredicted RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 CYP11A1P05108 521 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 ADRB2P07550 413 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 ATF6P18850 670 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 PLCG1P19174 1290 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 NMT1P30419 496 aaKnown RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 CNR2P34972 360 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 TAF6P49848 677 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 TNK2Q07912 1038 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 SRSF5Q13243 272 aaKnown RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 MCM6Q14566 821 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 CEP68Q76N32 757 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 THEM5Q8N1Q8 247 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 NETO1Q8TDF5 533 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 RAD54LQ92698 747 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 CNTNAP3BQ96NU0 1288 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 PYM1Q9BRP8 204 aaKnown RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 CNTNAP3Q9BZ76 1288 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 ZCWPW1Q9H0M4 648 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 TASP1Q9H6P5 420 aa15.92■□□□□ 0.14
PNKP-202ENST00000593706 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 ABI2Q9NYB9 513 aaPredicted RBP15.92■□□□□ 0.14
PNKP-202ENST00000593706 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 ANO9A1A5B4 782 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 K7ESF4 209 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 PIRO00625 290 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 CYB561D2O14569 222 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 ITPRIPL2Q3MIP1 535 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 WDR44Q5JSH3 913 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 USP49Q70CQ1 688 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 SPPL2BQ8TCT7 592 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 GIPC2Q8TF65 315 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 C2orf15Q8WU43 125 aaKnown RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 LARP4BQ92615 738 aaKnown RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 LRRC3BQ96PB8 259 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 USP28Q96RU2 1077 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 CCSER1Q9C0I3 900 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 SMG9Q9H0W8 520 aaKnown RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 ASB7Q9H672 318 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 SEMA4GQ9NTN9 838 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 C2CD2Q9Y426 696 aa15.91■□□□□ 0.14
PNKP-202ENST00000593706 SRPRBQ9Y5M8 271 aaKnown RBP15.91■□□□□ 0.14
PNKP-202ENST00000593706 CEP295Q9C0D2 2601 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 USP24Q9UPU5 2620 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 MYH10P35580 1976 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 THADAQ6YHU6 1953 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 TISP43B9A030 160 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 ANKRD63C9JTQ0 380 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 HRO43593 1189 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 KCNA4P22459 653 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 AVPR1AP37288 418 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 GTF2BQ00403 316 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 CCINQ13939 588 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 SV2CQ496J9 727 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 ZC2HC1CQ53FD0 456 aaPredicted RBP15.9■□□□□ 0.14
PNKP-202ENST00000593706 SLFN12LQ6IEE8 588 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 PRR23CQ6ZRP0 262 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 EPSTI1Q96J88 318 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 ZNF560Q96MR9 790 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 ZSCAN16Q9H4T2 348 aaPredicted RBP15.9■□□□□ 0.14
PNKP-202ENST00000593706 ZMYM5Q9UJ78 669 aa15.9■□□□□ 0.14
PNKP-202ENST00000593706 WEE1P30291 646 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 NASPP49321 788 aaPredicted RBP15.89■□□□□ 0.13
PNKP-202ENST00000593706 TSPY1Q01534 308 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 SMARCB1Q12824 385 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 BFSP1Q12934 665 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 SLC39A14Q15043 492 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 CSRP2Q16527 193 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 WSCD1Q658N2 575 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 DCP1BQ8IZD4 617 aaKnown RBP15.89■□□□□ 0.13
PNKP-202ENST00000593706 SYNPOQ8N3V7 929 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 FAM160A2Q8N612 972 aaPredicted RBP15.89■□□□□ 0.13
PNKP-202ENST00000593706 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
PNKP-202ENST00000593706 POMGNT1Q8WZA1 660 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 IL21Q9HBE4 155 aa15.89■□□□□ 0.13
PNKP-202ENST00000593706 C2orf42Q9NWW7 574 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms