RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ZNF560Q96MR9 790 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 RBM12Q9NTZ6 932 aaKnown RBP24.46■■□□□ 1.51
SSBP4-203ENST00000593641 GTSE1Q9NYZ3 720 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 STK17AQ9UEE5 414 aa24.46■■□□□ 1.51
SSBP4-203ENST00000593641 IL18RAPO95256 599 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 PRAMEF12O95522 483 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 WEE1P30291 646 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 CDR1P51861 262 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 LPAL2Q16609 132 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 WSCD1Q658N2 575 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 ZNF720Q7Z2F6 126 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 NT5DC4Q86YG4 428 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 DCP1BQ8IZD4 617 aaKnown RBP24.45■■□□□ 1.5
SSBP4-203ENST00000593641 EPSTI1Q96J88 318 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 LRRC3BQ96PB8 259 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 ABI2Q9NYB9 513 aaPredicted RBP24.45■■□□□ 1.5
SSBP4-203ENST00000593641 SEL1LQ9UBV2 794 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 ZMYM5Q9UJ78 669 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 EXOC7Q9UPT5 735 aa24.45■■□□□ 1.5
SSBP4-203ENST00000593641 TPRP12270 2363 aaKnown RBP24.45■■□□□ 1.5
SSBP4-203ENST00000593641 TULP1O00294 542 aaPredicted RBP24.44■■□□□ 1.5
SSBP4-203ENST00000593641 TXLNAP40222 546 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 TXNDC11Q6PKC3 985 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 EFCAB13Q8IY85 973 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 GIPC2Q8TF65 315 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 MRPL44Q9H9J2 332 aaKnown RBP24.44■■□□□ 1.5
SSBP4-203ENST00000593641 IL21Q9HBE4 155 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 THG1LQ9NWX6 298 aaKnown RBP24.44■■□□□ 1.5
SSBP4-203ENST00000593641 SPAG17Q6Q759 2223 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 OBSL1O75147 1896 aa24.44■■□□□ 1.5
SSBP4-203ENST00000593641 ATG2BQ96BY7 2078 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 KPNA7A9QM74 516 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 PNPLA4P41247 253 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 PON2Q15165 354 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 CRELD2Q6UXH1 353 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-203ENST00000593641 Q6ZS52 159 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 SDK1Q7Z5N4 2213 aa24.43■■□□□ 1.5
SSBP4-203ENST00000593641 PPP1R37O75864 691 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 PAPSS2O95340 614 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-203ENST00000593641 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-203ENST00000593641 HAPLN1P10915 354 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-203ENST00000593641 GAP43P17677 238 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 CNR2P34972 360 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 TSPY1Q01534 308 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 SPEM2Q0P670 501 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 SIM2Q14190 667 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-203ENST00000593641 PTPAQ15257 358 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 USP49Q70CQ1 688 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 LRRTM3Q86VH5 581 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 IKZF4Q9H2S9 585 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 PCDHB5Q9Y5E4 795 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 CLIC4Q9Y696 253 aa24.42■■□□□ 1.5
SSBP4-203ENST00000593641 CHURC1-FNTBB4DL54 471 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 RETP07949 1114 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 PDCP20941 246 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 TGM1P22735 817 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 ADSSP30520 456 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 AVPR1AP37288 418 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 FNTBP49356 437 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 ATXN1P54253 815 aaKnown RBP24.41■■□□□ 1.5
SSBP4-203ENST00000593641 TFAMQ00059 246 aaKnown RBP24.41■■□□□ 1.5
SSBP4-203ENST00000593641 TNK2Q07912 1038 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 ITPRIPL2Q3MIP1 535 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 RRAGBQ5VZM2 374 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 SV2BQ7L1I2 683 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 LONP2Q86WA8 852 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 CMTM8Q8IZV2 173 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 SYNPOQ8N3V7 929 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 ACCSQ96QU6 501 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 FAM213AQ9BRX8 229 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 SLC46A2Q9BY10 475 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 SMG9Q9H0W8 520 aaKnown RBP24.41■■□□□ 1.5
SSBP4-203ENST00000593641 PARD6AQ9NPB6 346 aa24.41■■□□□ 1.5
SSBP4-203ENST00000593641 LRP3O75074 770 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 GCNT3O95395 438 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 DDX6P26196 483 aaKnown RBP eCLIP24.4■■□□□ 1.52e-8■□□□□ 8.2
SSBP4-203ENST00000593641 DMWDQ09019 674 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 CCINQ13939 588 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 NFE2Q16621 373 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-203ENST00000593641 WDR44Q5JSH3 913 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 L1TD1Q5T7N2 865 aaKnown RBP24.4■■□□□ 1.5
SSBP4-203ENST00000593641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.4■■□□□ 1.5
SSBP4-203ENST00000593641 RTKNQ9BST9 563 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 TBC1D7Q9P0N9 293 aa24.4■■□□□ 1.5
SSBP4-203ENST00000593641 SRPRBQ9Y5M8 271 aaKnown RBP24.4■■□□□ 1.5
SSBP4-203ENST00000593641 MYMKA6NI61 221 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 K7ESF4 209 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 LDHAP00338 332 aaKnown RBP24.39■■□□□ 1.49
SSBP4-203ENST00000593641 POLR2BP30876 1174 aaKnown RBP24.39■■□□□ 1.49
SSBP4-203ENST00000593641 BFSP1Q12934 665 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 HEATR6Q6AI08 1181 aaKnown RBP24.39■■□□□ 1.49
SSBP4-203ENST00000593641 BRSK2Q8IWQ3 736 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 SYCP3Q8IZU3 236 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 CACTINQ8WUQ7 758 aaKnown RBP24.39■■□□□ 1.49
SSBP4-203ENST00000593641 SAAL1Q96ER3 474 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 STRA6Q9BX79 667 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 FBXO2Q9UK22 296 aaPredicted RBP24.39■■□□□ 1.49
SSBP4-203ENST00000593641 PCDHB13Q9Y5F0 798 aa24.39■■□□□ 1.49
SSBP4-203ENST00000593641 PRPF40AO75400 957 aaKnown RBP24.38■■□□□ 1.49
SSBP4-203ENST00000593641 ITGB3P05106 788 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms