RNA–Protein interactions for RNA: ENST00000592923.5

CNN1-210, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-210ENST00000592923 HMGXB4Q9UGU5 601 aa16.61■□□□□ 0.25
CNN1-210ENST00000592923 PTPN22Q9Y2R2 807 aa16.61■□□□□ 0.25
CNN1-210ENST00000592923 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
CNN1-210ENST00000592923 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
CNN1-210ENST00000592923 DYNC1LI2O43237 492 aaPredicted RBP16.6■□□□□ 0.25
CNN1-210ENST00000592923 GPR32O75388 356 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 MYZAPP0CAP1 466 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 PTPN7P35236 360 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 KCNJ1P48048 391 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 CDH8P55286 799 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 EIF3BP55884 814 aaKnown RBP16.6■□□□□ 0.25
CNN1-210ENST00000592923 KRT17Q04695 432 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 PTK6Q13882 451 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 CST9Q5W186 159 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 KAT2BQ92831 832 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 ART4Q93070 314 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 TMEM176AQ96HP8 235 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 TWNKQ96RR1 684 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 CHST7Q9NS84 486 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 DPP3Q9NY33 737 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 WDR35Q9P2L0 1181 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.6■□□□□ 0.25
CNN1-210ENST00000592923 AGAP1Q9UPQ3 857 aa16.6■□□□□ 0.25
CNN1-210ENST00000592923 NPTXRO95502 500 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 GAS8O95995 478 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 ZNF865P0CJ78 1059 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 SSR1P43307 286 aaKnown RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 OGDHQ02218 1023 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 CYP4A22Q5TCH4 519 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 EMC10Q5UCC4 262 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 KDM7AQ6ZMT4 941 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 RUFY4Q6ZNE9 571 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 RCOR2Q8IZ40 523 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 TMEM130Q8N3G9 435 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 FNIP1Q8TF40 1166 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 USP6NLQ92738 828 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 KIF12Q96FN5 646 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 SNX27Q96L92 541 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 FAM49AQ9H0Q0 323 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 WHRNQ9P202 907 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 FEZ2Q9UHY8 353 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 BARX2Q9UMQ3 279 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 ATP8A1Q9Y2Q0 1164 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 PDCD11Q14690 1871 aaKnown RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 A6NNZ2 444 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 HMGCRP04035 888 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 KRT1P04264 644 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 NUDT17P0C025 328 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 VDRP11473 427 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 FGFR4P22455 802 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 HOXA11P31270 313 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 GJC1P36383 396 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 PMS2P54278 862 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 COPS2P61201 443 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 MFSD10Q14728 455 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 TAF1CQ15572 869 aaPredicted RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 CCNG2Q16589 344 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 TUBB8Q3ZCM7 444 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 NOTUMQ6P988 496 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 CATSPER4Q7RTX7 472 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 ATG4AQ8WYN0 398 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 DDX56Q9NY93 547 aaKnown RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 FLRT1Q9NZU1 646 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
CNN1-210ENST00000592923 R3HDM2Q9Y2K5 976 aaKnown RBP16.59■□□□□ 0.25
CNN1-210ENST00000592923 DOCK3Q8IZD9 2030 aa16.58■□□□□ 0.25
CNN1-210ENST00000592923 SIGLEC16A6NMB1 481 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 HAS3O00219 553 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 MICAL2O94851 1124 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 CYP2C9P11712 490 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 DARSP14868 501 aaKnown RBP16.58■□□□□ 0.24
CNN1-210ENST00000592923 CPT1AP50416 773 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 CALCOCO2Q13137 446 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 LLGL1Q15334 1064 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 AGBL2Q5U5Z8 902 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 POLNQ7Z5Q5 900 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 OR2W6PQ8NHA6 318 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 EPB41L4BQ9H329 900 aa16.58■□□□□ 0.24
CNN1-210ENST00000592923 PABPC3Q9H361 631 aaKnown RBP16.58■□□□□ 0.24
CNN1-210ENST00000592923 CWC15Q9P013 229 aaKnown RBP16.58■□□□□ 0.24
CNN1-210ENST00000592923 M0QYV0 167 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 NR1D1P20393 614 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 GABRB2P47870 512 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 PSEN2P49810 448 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 PSMC1P62191 440 aaKnown RBP16.57■□□□□ 0.24
CNN1-210ENST00000592923 ADAM17P78536 824 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 ORC1Q13415 861 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 SNX1Q13596 522 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 SLMAPQ14BN4 828 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 CNGA2Q16280 664 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 KCTD16Q68DU8 428 aa16.57■□□□□ 0.24
CNN1-210ENST00000592923 XYLT1Q86Y38 959 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms