RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ERVK-24P63145 666 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 CUL3Q13618 768 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 EFHC1Q5JVL4 640 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 IL31Q6EBC2 164 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 TAF2Q6P1X5 1199 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 TMC7Q7Z402 723 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 SYF2O95926 243 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 APOA1P02647 267 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 CCND1P24385 295 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 POU5F1BQ06416 359 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 UGP2Q16851 508 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 C10orf120Q5SQS8 335 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 SENP2Q9HC62 589 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 KLK14Q9P0G3 267 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 DNAJC6O75061 913 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 RPL10AP62906 217 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 ZC2HC1CQ53FD0 456 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 RABGAP1LQ5R372 815 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 MMGT1Q8N4V1 131 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 C3orf20Q8ND61 904 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 NDFIP2Q9NV92 336 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
SMARCA4-216ENST00000591545 NFIBO00712 420 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 ZC3H11AO75152 810 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 RAB27AP51159 221 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 EIF3EP60228 445 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 MTF1Q14872 753 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 KRT35Q92764 455 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 PPP1R2P1Q96PQ5 205 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 ZC4H2Q9NQZ6 224 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 DPP3Q9NY33 737 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SALL3Q9BXA9 1300 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 ZNF197O14709 1029 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CYP2C8P10632 490 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SP3Q02447 781 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 ARHGEF7Q14155 803 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 NAB2Q15742 525 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CHSY1Q86X52 802 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SLC13A1Q9BZW2 595 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 FOXN1O15353 648 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 FKTNO75072 461 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CABYRO75952 493 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CHN1P15882 459 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 FGFR4P22455 802 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SHMT1P34896 483 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 TLK2Q86UE8 772 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 HPS3Q969F9 1004 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 EPC1Q9H2F5 836 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SYNDIG1Q9H7V2 258 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 PKD2L2Q9NZM6 624 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 DSEQ9UL01 958 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 PXDNQ92626 1479 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 FAM47DPA6NHR8 397 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 C16orf96A6NNT2 1141 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 THEMIS2Q5TEJ8 643 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 PRUNE1Q86TP1 453 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 APLFQ8IW19 511 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 ATPAF2Q8N5M1 289 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 DACH2Q96NX9 599 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 EGFL8Q99944 293 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 MRIQ9BWK5 157 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 CYP4F11Q9HBI6 524 aa13.91□□□□□ -0.18
SMARCA4-216ENST00000591545 KLHL2O95198 593 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 CDH2P19022 906 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 KLC1Q07866 573 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 MED21Q13503 144 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 LAMB3Q13751 1172 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 LRRC8EQ6NSJ5 796 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 MPZL3Q6UWV2 235 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 C4orf22Q6V702 233 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 RNF217Q8TC41 542 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 PRMT1Q99873 361 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 UBA6A0AVT1 1052 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 ITGB3P05106 788 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 THP07101 528 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 ARP10275 920 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 SLC2A3P11169 496 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 AMPD2Q01433 879 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 VGLL4Q14135 290 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 FASTKD1Q53R41 847 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 COG4Q9H9E3 785 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 AMHP03971 560 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 ALDH2P05091 517 aa13.9□□□□□ -0.18
SMARCA4-216ENST00000591545 IRX1P78414 480 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms