RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 HCRTO43612 131 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 ABLIM3O94929 683 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 TBXAS1P24557 533 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-214ENST00000590556 PON1P27169 355 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 RBM10P98175 930 aaKnown RBP20.45■□□□□ 0.86
DDX39A-214ENST00000590556 GPR17Q13304 367 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 TPGS2Q68CL5 300 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 TRIM65Q6PJ69 517 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 APTXQ7Z2E3 356 aaKnown RBP20.45■□□□□ 0.86
DDX39A-214ENST00000590556 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
DDX39A-214ENST00000590556 PPM1KQ8N3J5 372 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 RNF214Q8ND24 703 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 VN1R2Q8NFZ6 395 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 ZNF461Q8TAF7 563 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 ARID3AQ99856 593 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 SYT15Q9BQS2 421 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 CDH9Q9ULB4 789 aa20.45■□□□□ 0.86
DDX39A-214ENST00000590556 CD58P19256 250 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 KCNC3Q14003 757 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 COL19A1Q14993 1142 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 CTC1Q2NKJ3 1217 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 SLC39A12Q504Y0 691 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 INTS6LQ5JSJ4 861 aaKnown RBP20.44■□□□□ 0.86
DDX39A-214ENST00000590556 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 TMEM184AQ6ZMB5 413 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 RNF19BQ6ZMZ0 732 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 LRRTM3Q86VH5 581 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 UNC93AQ86WB7 457 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 ARHGEF19Q8IW93 802 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 TTC39CQ8N584 583 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 KREMEN2Q8NCW0 462 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 CASP10Q92851 521 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 PABPC5Q96DU9 382 aaKnown RBP20.44■□□□□ 0.86
DDX39A-214ENST00000590556 AFF4Q9UHB7 1163 aaKnown RBP20.44■□□□□ 0.86
DDX39A-214ENST00000590556 DPP7Q9UHL4 492 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 BARX2Q9UMQ3 279 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-214ENST00000590556 NME7Q9Y5B8 376 aa20.44■□□□□ 0.86
DDX39A-214ENST00000590556 ATP2C2O75185 946 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 GLP2RO95838 553 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 SERPINC1P01008 464 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 ELF1P32519 619 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 NDST1P52848 882 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 PSMC1P62191 440 aaKnown RBP20.43■□□□□ 0.86
DDX39A-214ENST00000590556 YWHAEP62258 255 aaKnown RBP20.43■□□□□ 0.86
DDX39A-214ENST00000590556 UBXN1Q04323 297 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 INCA1Q0VD86 236 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 SMARCB1Q12824 385 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 FILIP1LQ4L180 1135 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 PHLDB3Q6NSJ2 640 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 RRAGAQ7L523 313 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 HDAC7Q8WUI4 952 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 PGLYRP2Q96PD5 576 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 PLEKHA4Q9H4M7 779 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 FAM124BQ9H5Z6 455 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-214ENST00000590556 UBE2TQ9NPD8 197 aaPredicted RBP20.43■□□□□ 0.86
DDX39A-214ENST00000590556 MAN1C1Q9NR34 630 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 CISHQ9NSE2 258 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 DZANK1Q9NVP4 752 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 FBXW11Q9UKB1 542 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 MAFFQ9ULX9 164 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 BRWD1Q9NSI6 2320 aa20.43■□□□□ 0.86
DDX39A-214ENST00000590556 MTCL1Q9Y4B5 1905 aaKnown RBP20.43■□□□□ 0.86
DDX39A-214ENST00000590556 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 CILPO75339 1184 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 ATF2P15336 505 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 PTPN1P18031 435 aaKnown RBP20.42■□□□□ 0.86
DDX39A-214ENST00000590556 FANCCQ00597 558 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 GCNT1Q02742 428 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 ADCY1Q08828 1119 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 KCNMA1Q12791 1236 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 NFE2Q16621 373 aaPredicted RBP20.42■□□□□ 0.86
DDX39A-214ENST00000590556 TNIP3Q96KP6 325 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 LSM14BQ9BX40 385 aaKnown RBP20.42■□□□□ 0.86
DDX39A-214ENST00000590556 DNAI2Q9GZS0 605 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 DPEP3Q9H4B8 488 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 CRTAC1Q9NQ79 661 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 APEX2Q9UBZ4 518 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 GTF3C4Q9UKN8 822 aa20.42■□□□□ 0.86
DDX39A-214ENST00000590556 MYBPHLA2RUH7 354 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 MTMR11A4FU01 709 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 PRRG1O14668 218 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 TRIM21P19474 475 aaKnown RBP20.41■□□□□ 0.86
DDX39A-214ENST00000590556 CDR1P51861 262 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 APBA1Q02410 837 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 MAPRE1Q15691 268 aaKnown RBP20.41■□□□□ 0.86
DDX39A-214ENST00000590556 LIN9Q5TKA1 542 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 FAM171BQ6P995 826 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 CCDC149Q6ZUS6 474 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 ENOSF1Q7L5Y1 443 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 ACOT1Q86TX2 421 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 B3GALNT2Q8NCR0 500 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 C2orf15Q8WU43 125 aaKnown RBP20.41■□□□□ 0.86
DDX39A-214ENST00000590556 KAT5Q92993 513 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 HLA-CQ95604 372 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 FAM81BQ96LP2 452 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 PKMYT1Q99640 499 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 NT5C1AQ9BXI3 368 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 UBE2ZQ9H832 354 aaPredicted RBP20.41■□□□□ 0.86
DDX39A-214ENST00000590556 CYP4F11Q9HBI6 524 aa20.41■□□□□ 0.86
DDX39A-214ENST00000590556 SIX2Q9NPC8 291 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms