RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RMND1Q9NWS8 449 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 FBXW11Q9UKB1 542 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 SCN1AP35498 2009 aa11.18□□□□□ -0.62
SDF2-208ENST00000589788 KINO60870 393 aaKnown RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 RFPL2O75678 378 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SMC2O95347 1197 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 ITGB3P05106 788 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 C8AP07357 584 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 KRT19P08727 400 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 CPB1P15086 417 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 TYMPP19971 482 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SP100P23497 879 aaPredicted RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 POLR2BP30876 1174 aaKnown RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 ELF1P32519 619 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 PNPLA4P41247 253 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 UBE2HP62256 183 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 ROR1Q01973 937 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 CYP24A1Q07973 514 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 PNOCQ13519 176 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SNW1Q13573 536 aaKnown RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 MRPL58Q14197 206 aaKnown RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 SV2CQ496J9 727 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SLC8B1Q6J4K2 584 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 RSPO2Q6UXX9 243 aaPredicted RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 CCDC149Q6ZUS6 474 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 METTL23Q86XA0 190 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SIX5Q8N196 739 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 CSGALNACT2Q8N6G5 542 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 ENGASEQ8NFI3 743 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 ZNF461Q8TAF7 563 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 CCDC127Q96BQ5 260 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 SENP8Q96LD8 212 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 TIGD1Q96MW7 591 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 CDK15Q96Q40 435 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 OXCT2Q9BYC2 517 aaPredicted RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 MTMR12Q9C0I1 747 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 INTS13Q9NVM9 706 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 FBXL5Q9UKA1 691 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 ITGA11Q9UKX5 1188 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 DSEQ9UL01 958 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 AGAP1Q9UPQ3 857 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 MAPK8IP1Q9UQF2 711 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
SDF2-208ENST00000589788 C2orf16Q68DN1 1984 aa11.17□□□□□ -0.62
SDF2-208ENST00000589788 A0A0C4DFX4 3053 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 KPNA7A9QM74 516 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 PDXKO00764 312 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 CYB561D2O14569 222 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 PRRG1O14668 218 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 SIAH2O43255 324 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 CALUO43852 315 aaPredicted RBP11.16□□□□□ -0.62
SDF2-208ENST00000589788 TBC1D4O60343 1298 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 OAZ2O95190 189 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 HNRNPA1P09651 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
SDF2-208ENST00000589788 DLATP10515 647 aaKnown RBP11.16□□□□□ -0.62
SDF2-208ENST00000589788 TNNI1P19237 187 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 RBP5P82980 135 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 BFSP1Q12934 665 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 DUOXA2Q1HG44 320 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 UVSSAQ2YD98 709 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 TPGS2Q68CL5 300 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
SDF2-208ENST00000589788 RTL10Q7L3V2 364 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
SDF2-208ENST00000589788 WDR49Q8IV35 697 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 C1orf127Q8N9H9 656 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 SLC7A14Q8TBB6 771 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 SMARCE1Q969G3 411 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 GSDMAQ96QA5 445 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 RHOBTB2Q9BYZ6 727 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 KCTD10Q9H3F6 313 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 PCDHGA11Q9Y5H2 935 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 BDP1A6H8Y1 2624 aa11.16□□□□□ -0.62
SDF2-208ENST00000589788 WDR27A2RRH5 827 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 OR6C75A6NL08 312 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 XYLBO75191 536 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 GADD45BO75293 160 aaPredicted RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 ABLIM3O94929 683 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 NR3C1P04150 777 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 ATF2P15336 505 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 HOXA9P31269 272 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 SCTRP47872 440 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 RAB15P59190 212 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 MYO1EQ12965 1108 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 PSMD6Q15008 389 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 PHLDB3Q6NSJ2 640 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 SLC9A9Q8IVB4 645 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 THEM5Q8N1Q8 247 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 GUF1Q8N442 669 aaKnown RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 LRRC52Q8N7C0 313 aa11.15□□□□□ -0.62
SDF2-208ENST00000589788 TDRD5Q8NAT2 981 aaKnown RBP11.15□□□□□ -0.62
SDF2-208ENST00000589788 OR5B17Q8NGF7 314 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms