RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	CDH22	Q9UJ99	828 aa		10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	FBXL5	Q9UKA1	691 aa		10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	ADAM28	Q9UKQ2	775 aa		10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	SSX2IP	Q9Y2D8	614 aa		10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	NR2E1	Q9Y466	385 aa		10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
U2AF1L4-208	ENST00000587987	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.14	□□□□□ -0.79	8e-6	■■■■■ 107
U2AF1L4-208	ENST00000587987		M0QZQ0	153 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SYN3	O14994	580 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TRIM21	P19474	475 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TYMP	P19971	482 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PON1	P27169	355 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ID4	P47928	161 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SLC11A1	P49279	550 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	AARS	P49588	968 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	GUCY2F	P51841	1108 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	MFAP3	P55082	362 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	GCNT1	Q02742	428 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	FIGN	Q5HY92	759 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PDE12	Q6L8Q7	609 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TRIM65	Q6PJ69	517 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	DDX53	Q86TM3	631 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	METTL23	Q86XA0	190 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	GPR65	Q8IYL9	337 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	UBALD2	Q8IYN6	164 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	APPL2	Q8NEU8	664 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	NEK11	Q8NG66	645 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	LMO3	Q8TAP4	145 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	MRFAP1L1	Q96HT8	127 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	IGSF21	Q96ID5	467 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SUSD3	Q96L08	255 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TCF25	Q9BQ70	676 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	XPO4	Q9C0E2	1151 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	INTS2	Q9H0H0	1204 aa	Known RBP	10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	XYLT2	Q9H1B5	865 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	MFSD1	Q9H3U5	465 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	GRPEL1	Q9HAV7	217 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	GOLGA2P5	Q9HBQ8	144 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	DNAJB4	Q9UDY4	337 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SORCS3	Q9UPU3	1222 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	LZTS1	Q9Y250	596 aa		10.14	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ITIH6	Q6UXX5	1313 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	C2CD4D	B7Z1M9	353 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CYB561D2	O14569	222 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TEX33	O43247	280 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TACC1	O75410	805 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CLSTN1	O94985	981 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TPM1	P09493	284 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ODC1	P11926	461 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SLC9A1	P19634	815 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	LHX1	P48742	406 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	NOP14	P78316	857 aa	Known RBP	10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	KCNMA1	Q12791	1236 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TRIM14	Q14142	442 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SYCP1	Q15431	976 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	USP41	Q3LFD5	358 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	KLHDC7A	Q5VTJ3	777 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ASTL	Q6HA08	431 aa	Predicted RBP	10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TMEM184A	Q6ZMB5	413 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SLC39A11	Q8N1S5	342 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SEMA4D	Q92854	862 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SENP8	Q96LD8	212 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	MMS19	Q96T76	1030 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CRACR2A	Q9BSW2	395 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	NIF3L1	Q9GZT8	377 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	NUCKS1	Q9H1E3	243 aa	Known RBP	10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	POMK	Q9H5K3	350 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	APEX2	Q9UBZ4	518 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PCDHB8	Q9UN66	801 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SIK3	Q9Y2K2	1263 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SNX9	Q9Y5X1	595 aa		10.13	□□□□□ -0.79
U2AF1L4-208	ENST00000587987		A0A1W2PQJ5	194 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	HIDE1	A8MVS5	230 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987		H7C4K7	107 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	KIF4A	O95239	1232 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CYP11A1	P05108	521 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ASGR2	P07307	311 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CCDC172	P0C7W6	258 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	HOXB8	P17481	243 aa	Predicted RBP	10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PBX1	P40424	430 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CREM	Q03060	361 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CUL2	Q13617	745 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	KCNC3	Q14003	757 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	SPECC1L	Q69YQ0	1117 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PHLDB3	Q6NSJ2	640 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CES5A	Q6NT32	575 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	FUT10	Q6P4F1	479 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CD300LG	Q6UXG3	332 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	LIMS2	Q7Z4I7	341 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	UNC93A	Q86WB7	457 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	VSTM4	Q8IW00	320 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	THEM5	Q8N1Q8	247 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PPM1K	Q8N3J5	372 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	TDRD5	Q8NAT2	981 aa	Known RBP	10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	ZNF397	Q8NF99	534 aa	Predicted RBP	10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	CASP10	Q92851	521 aa		10.12	□□□□□ -0.79
U2AF1L4-208	ENST00000587987	PAAF1	Q9BRP4	392 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms