RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 E2F7Q96AV8 911 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 DHX58Q96C10 678 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 ZFYVE19Q96K21 471 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
VMP1-206ENST00000587945 TMEM206Q9H813 350 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 TRPV5Q9NQA5 729 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 L1RE1Q9UN81 338 aa15.45■□□□□ 0.06
VMP1-206ENST00000587945 SLC38A8A6NNN8 435 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 DPYSL4O14531 572 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 HCRTO43612 131 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 PPP6R2O75170 966 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 PRAMEF12O95522 483 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 KRT19P08727 400 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 ACAT1P24752 427 aaKnown RBP15.44■□□□□ 0.06
VMP1-206ENST00000587945 CCNE1P24864 410 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 HOXD13P35453 343 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 PNPLA4P41247 253 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 FCHO2Q0JRZ9 810 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 TAF12Q16514 161 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 CCDC142Q17RM4 750 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 ZNF528Q3MIS6 628 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 ARHGAP15Q53QZ3 475 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 SDHAF4Q5VUM1 108 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 DCP1BQ8IZD4 617 aaKnown RBP15.44■□□□□ 0.06
VMP1-206ENST00000587945 GPD1LQ8N335 351 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 CSGALNACT1Q8TDX6 532 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 C2orf15Q8WU43 125 aaKnown RBP15.44■□□□□ 0.06
VMP1-206ENST00000587945 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
VMP1-206ENST00000587945 PI4K2AQ9BTU6 479 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 MTMR12Q9C0I1 747 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 SMG9Q9H0W8 520 aaKnown RBP15.44■□□□□ 0.06
VMP1-206ENST00000587945 TNMDQ9H2S6 317 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 TASP1Q9H6P5 420 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 LMAN1LQ9HAT1 526 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 KBTBD4Q9NVX7 518 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 SIX4Q9UIU6 781 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 PCDHB5Q9Y5E4 795 aa15.44■□□□□ 0.06
VMP1-206ENST00000587945 CHADO15335 359 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
VMP1-206ENST00000587945 HUS1O60921 280 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 FGF19O95750 216 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 KPNA1P52294 538 aaPredicted RBP15.43■□□□□ 0.06
VMP1-206ENST00000587945 ASIC1P78348 528 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 TSPY1Q01534 308 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 SMARCB1Q12824 385 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 CBWD2Q8IUF1 395 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 DCLK2Q8N568 766 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 SUMF1Q8NBK3 374 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 OR5B17Q8NGF7 314 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 SNX21Q969T3 373 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 HINFPQ9BQA5 517 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 CHRDQ9H2X0 955 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 DDX43Q9NXZ2 648 aaKnown RBP15.43■□□□□ 0.06
VMP1-206ENST00000587945 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 GVINP1Q7Z2Y8 2422 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 CACNA1IQ9P0X4 2223 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 PTPRJQ12913 1337 aa15.43■□□□□ 0.06
VMP1-206ENST00000587945 EP300Q09472 2414 aaPredicted RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 CUTAO60888 179 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 YEATS4O95619 227 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 CHRNB1P11230 501 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 HMGA1P17096 107 aaKnown RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 CASP1P29466 404 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 CDC25CP30307 473 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 RBP5P82980 135 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 TNK2Q07912 1038 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 TMEM150AQ86TG1 271 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 KIAA2013Q8IYS2 634 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 LRRC52Q8N7C0 313 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 ATRIPQ8WXE1 791 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 GCNAQ96QF7 691 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 RBM12Q9NTZ6 932 aaKnown RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 INTS13Q9NVM9 706 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 GTSE1Q9NYZ3 720 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 HSPBP1Q9NZL4 362 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 MAGED2Q9UNF1 606 aaPredicted RBP15.42■□□□□ 0.06
VMP1-206ENST00000587945 GPR179Q6PRD1 2367 aa15.42■□□□□ 0.06
VMP1-206ENST00000587945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.41■□□□□ 0.06
VMP1-206ENST00000587945 ZNF233A6NK53 670 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 POLR2DO15514 142 aaKnown RBP15.41■□□□□ 0.06
VMP1-206ENST00000587945 CYP2F1P24903 491 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 NLRP12P59046 1061 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 AMPD3Q01432 767 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 GAS6Q14393 721 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 NFE2Q16621 373 aaPredicted RBP15.41■□□□□ 0.06
VMP1-206ENST00000587945 DDR2Q16832 855 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 SOWAHAQ2M3V2 549 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 WDR44Q5JSH3 913 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 INTS6LQ5JSJ4 861 aaKnown RBP15.41■□□□□ 0.06
VMP1-206ENST00000587945 TXNDC11Q6PKC3 985 aa15.41■□□□□ 0.06
VMP1-206ENST00000587945 STXBP4Q6ZWJ1 553 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms