RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 DNAI2Q9GZS0 605 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 CLDND1Q9NY35 253 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 FBXW11Q9UKB1 542 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 CDH9Q9ULB4 789 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 COG5Q9UP83 839 aa20.48■□□□□ 0.87
DDX39A-204ENST00000586558 LGALS16A8MUM7 142 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 LINC01565O15544 149 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 ATP1A3P13637 1013 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 ATF2P15336 505 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 HOXB8P17481 243 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 COPB1P53618 953 aaKnown RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 YWHAEP62258 255 aaKnown RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 CUL2Q13617 745 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 MAPRE1Q15691 268 aaKnown RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 NFE2Q16621 373 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 FKBP15Q5T1M5 1219 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 LLGL2Q6P1M3 1020 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 KREMEN2Q8NCW0 462 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 C2orf15Q8WU43 125 aaKnown RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 HLA-CQ95604 372 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 FAM81BQ96LP2 452 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 SYT15Q9BQS2 421 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 ANP32EQ9BTT0 268 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 SDCBP2Q9H190 292 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 VPS16Q9H269 839 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 UBE2ZQ9H832 354 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 MAN1C1Q9NR34 630 aa20.47■□□□□ 0.87
DDX39A-204ENST00000586558 BARX2Q9UMQ3 279 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-204ENST00000586558 A8MXQ7 604 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 TRIM21P19474 475 aaKnown RBP20.46■□□□□ 0.87
DDX39A-204ENST00000586558 RAP1GAPP47736 663 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 CDH8P55286 799 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 GCNT1Q02742 428 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 LIN9Q5TKA1 542 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 SMYD5Q6GMV2 418 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 TRIM65Q6PJ69 517 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 CCDC149Q6ZUS6 474 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 TATDN2Q93075 761 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 TNIP3Q96KP6 325 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 CRACR2AQ9BSW2 395 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
DDX39A-204ENST00000586558 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-204ENST00000586558 TBX10O75333 385 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 OR4Q2P0C623 313 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 ACAT1P24752 427 aaKnown RBP20.45■□□□□ 0.86
DDX39A-204ENST00000586558 LMO2P25791 158 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 ELF1P32519 619 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 RBM10P98175 930 aaKnown RBP20.45■□□□□ 0.86
DDX39A-204ENST00000586558 LRMPQ12912 555 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 SLC39A12Q504Y0 691 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 ENOSF1Q7L5Y1 443 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 APTXQ7Z2E3 356 aaKnown RBP20.45■□□□□ 0.86
DDX39A-204ENST00000586558 TCEAL8Q8IYN2 117 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 PPM1KQ8N3J5 372 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 JAKMIP2Q96AA8 810 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 TMEM209Q96SK2 561 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 PKMYT1Q99640 499 aa20.45■□□□□ 0.86
DDX39A-204ENST00000586558 CILPO75339 1184 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 PDGFRBP09619 1106 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 PON1P27169 355 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 LTBRP36941 435 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 ADCY1Q08828 1119 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 ANKRD54Q6NXT1 300 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 FAM171BQ6P995 826 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 RNF19BQ6ZMZ0 732 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 EP400NLQ6ZTU2 488 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 B3GALNT2Q8NCR0 500 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 CMASQ8NFW8 434 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-204ENST00000586558 SPPL2BQ8TCT7 592 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 ARID3AQ99856 593 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 NT5C1AQ9BXI3 368 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 SFXN1Q9H9B4 322 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 ABCB6Q9NP58 842 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 CISHQ9NSE2 258 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 ZDHHC7Q9NXF8 308 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 CLEC1BQ9P126 229 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 APEX2Q9UBZ4 518 aa20.44■□□□□ 0.86
DDX39A-204ENST00000586558 MTMR11A4FU01 709 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 SPDYE4A6NLX3 237 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 PRRG1O14668 218 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 ZMYND10O75800 440 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 PAPLNO95428 1278 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 HNRNPA1P09651 372 aaKnown RBP eCLIP20.43■□□□□ 0.86
DDX39A-204ENST00000586558 SPATA31D3P0C874 917 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 PTPN1P18031 435 aaKnown RBP20.43■□□□□ 0.86
DDX39A-204ENST00000586558 CD58P19256 250 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 SLC9A1P19634 815 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 HOXA9P31269 272 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 NDST1P52848 882 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 FILIP1LQ4L180 1135 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 C4orf50Q6ZRC1 276 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 SPATA31D4Q6ZUB0 917 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 LRRTM3Q86VH5 581 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 ARHGEF19Q8IW93 802 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 CRYBG2Q8N1P7 616 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 MYCBPAPQ8TBZ2 947 aa20.43■□□□□ 0.86
DDX39A-204ENST00000586558 FUBP3Q96I24 572 aaKnown RBP eCLIP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms