RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ALG13Q9NP73 1137 aaKnown RBP13.51□□□□□ -0.25
VMP1-202ENST00000585847 NLRC4Q9NPP4 1024 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 AAASQ9NRG9 546 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 PYCARDQ9ULZ3 195 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 PCDHB12Q9Y5F1 795 aa13.51□□□□□ -0.25
VMP1-202ENST00000585847 CHD7Q9P2D1 2997 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 AKR1B10O60218 316 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 CLCN1P35523 988 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 LILRA4P59901 499 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 ERVFC1P60507 584 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 MYL6P60660 151 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
VMP1-202ENST00000585847 RBP5P82980 135 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 MYO1EQ12965 1108 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 GPM6BQ13491 265 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 TDRD12Q587J7 1177 aaKnown RBP13.5□□□□□ -0.25
VMP1-202ENST00000585847 LIMS2Q7Z4I7 341 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 DDX53Q86TM3 631 aaKnown RBP13.5□□□□□ -0.25
VMP1-202ENST00000585847 FAM71AQ8IYT1 594 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 POF1BQ8WVV4 589 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 FAM122AQ96E09 287 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 SUSD3Q96L08 255 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
VMP1-202ENST00000585847 C1QTNF1Q9BXJ1 281 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 CYP3A43Q9HB55 503 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 APOBEC3GQ9HC16 384 aaKnown RBP13.5□□□□□ -0.25
VMP1-202ENST00000585847 INTUQ9ULD6 942 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 PPP2R2CQ9Y2T4 447 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 ADGRG1Q9Y653 693 aa13.5□□□□□ -0.25
VMP1-202ENST00000585847 M0QZQ0 153 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 FSCN2O14926 492 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 KRT86O43790 486 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 LILRB3O75022 631 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 TADA2AO75478 443 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 KRT19P08727 400 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 IRS1P35568 1242 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 PPM1AP35813 382 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 TAF6P49848 677 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 KIF11P52732 1056 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 TFF2Q03403 129 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 CUL2Q13617 745 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
VMP1-202ENST00000585847 ZNF699Q32M78 642 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
VMP1-202ENST00000585847 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 SPOPLQ6IQ16 392 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 PHLDB3Q6NSJ2 640 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 ZNF560Q96MR9 790 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 HERC2P3Q9BVR0 1158 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 ZBP1Q9H171 429 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
VMP1-202ENST00000585847 CHST7Q9NS84 486 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 CNTN6Q9UQ52 1028 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 NME7Q9Y5B8 376 aa13.49□□□□□ -0.25
VMP1-202ENST00000585847 ARHGEF37A1IGU5 675 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 RNF225M0QZC1 329 aaPredicted RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 SOD2P04179 222 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 FGFR3P22607 806 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 TKTP29401 623 aaKnown RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 PLA2G5P39877 138 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 PDE6CP51160 858 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 UBE3AQ05086 875 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 MRPL58Q14197 206 aaKnown RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 ASTE1Q2TB18 679 aaPredicted RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 ARHGAP29Q52LW3 1261 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 TRIM72Q6ZMU5 477 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 NECAB3Q96P71 396 aaPredicted RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 SDCBP2Q9H190 292 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.25
VMP1-202ENST00000585847 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 POLIQ9UNA4 740 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 NUB1Q9Y5A7 615 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 TCF20Q9UGU0 1960 aaKnown RBP13.48□□□□□ -0.25
VMP1-202ENST00000585847 TRANK1O15050 2925 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 NCOR1O75376 2440 aa13.48□□□□□ -0.25
VMP1-202ENST00000585847 SF3B1O75533 1304 aaKnown RBP eCLIP13.47□□□□□ -0.252e-7■■■■■ 143.6
VMP1-202ENST00000585847 BTNL10A8MVZ5 291 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 KIF5CO60282 957 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 CTSAP10619 480 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 BMP1P13497 986 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 KCNQ1P51787 676 aa13.47□□□□□ -0.25
VMP1-202ENST00000585847 VAV2P52735 878 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms