RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	SCARA3	Q6AZY7	606 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460		Q6ZS52	159 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	TMEM150A	Q86TG1	271 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	BPIFB1	Q8TDL5	484 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	C2orf15	Q8WU43	125 aa	Known RBP	17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	DNAJC19	Q96DA6	116 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	CLIC6	Q96NY7	704 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	SMG9	Q9H0W8	520 aa	Known RBP	17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	UPF2	Q9HAU5	1272 aa	Known RBP	17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	GKN1	Q9NS71	199 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	TMLHE	Q9NVH6	421 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	TBC1D7	Q9P0N9	293 aa		17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	SRPRB	Q9Y5M8	271 aa	Known RBP	17.66	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	NCOR2	Q9Y618	2525 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	MIA3	Q5JRA6	1907 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	VPS37C	A5D8V6	355 aa	Predicted RBP	17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	PRR5-ARHGAP8	B1AHC4	643 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	CHURC1-FNTB	B4DL54	471 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460		K7ESF4	209 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	IL18RAP	O95256	599 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	F11	P03951	625 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	HMGA1	P17096	107 aa	Known RBP	17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	CDC25C	P30307	473 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	HOXC13	P31276	330 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	FNTB	P49356	437 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	ARHGAP8	P85298	464 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	PON2	Q15165	354 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	TAF12	Q16514	161 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	RRAGB	Q5VZM2	374 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	FAM173B	Q6P4H8	233 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	SV2B	Q7L1I2	683 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	DCP1B	Q8IZD4	617 aa	Known RBP	17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	SPPL2B	Q8TCT7	592 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	HVCN1	Q96D96	273 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	FAM213A	Q9BRX8	229 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	MRPL44	Q9H9J2	332 aa	Known RBP	17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	ABI2	Q9NYB9	513 aa	Predicted RBP	17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	SEL1L	Q9UBV2	794 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	STK17A	Q9UEE5	414 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	CCDC39	Q9UFE4	941 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	GMEB2	Q9UKD1	530 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	USP18	Q9UMW8	372 aa		17.65	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	DNAH14	Q0VDD8	3507 aa		17.64	■□□□□ 0.42
PRKAR1A-206	ENST00000585460	PAPSS2	O95340	614 aa	Predicted RBP	17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SDHB	P21912	280 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	TFAM	Q00059	246 aa	Known RBP	17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PLCB2	Q00722	1185 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	LMNB2	Q03252	620 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SV2C	Q496J9	727 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	NT5DC4	Q86YG4	428 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CMTM8	Q8IZV2	173 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	ACCS	Q96QU6	501 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	FAM83C	Q9BQN1	747 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PANK2	Q9BZ23	570 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	THG1L	Q9NWX6	298 aa	Known RBP	17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	RAB23	Q9ULC3	237 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	AGAP1	Q9UPQ3	857 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PCDHB5	Q9Y5E4	795 aa		17.64	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	TULP1	O00294	542 aa	Predicted RBP	17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	RET	P07949	1114 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	GAP43	P17677	238 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	GPR15	P49685	360 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	NLRP12	P59046	1061 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SPEM2	Q0P670	501 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SRSF5	Q13243	272 aa	Known RBP	17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CCIN	Q13939	588 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SIM2	Q14190	667 aa	Predicted RBP	17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	ITPRIPL2	Q3MIP1	535 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	L1TD1	Q5T7N2	865 aa	Known RBP	17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	LAIR1	Q6GTX8	287 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PRR23B	Q6ZRT6	265 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PDCL2	Q8N4E4	241 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	C1orf127	Q8N9H9	656 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CXorf38	Q8TB03	319 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SAAL1	Q96ER3	474 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	GCNA	Q96QF7	691 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PI4K2A	Q9BTU6	479 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	EXOC7	Q9UPT5	735 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CCL26	Q9Y258	94 aa		17.63	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	OTOL1	A6NHN0	477 aa	Predicted RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PRPF40A	O75400	957 aa	Known RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	POLR2B	P30876	1174 aa	Known RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	HOXA6	P31267	233 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PNPLA4	P41247	253 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CASP5	P51878	434 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CEBPZ	Q03701	1054 aa	Known RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	REST	Q13127	1097 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SDHAF4	Q5VUM1	108 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	TXNDC8	Q6A555	127 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	HEATR6	Q6AI08	1181 aa	Known RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	LONP2	Q86WA8	852 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	SYNPO	Q8N3V7	929 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	MAB21L3	Q8N8X9	362 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	CACTIN	Q8WUQ7	758 aa	Known RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	USP13	Q92995	863 aa	Predicted RBP	17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	FAM84A	Q96KN4	292 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	ACBD6	Q9BR61	282 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	FGFBP2	Q9BYJ0	223 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	L1RE1	Q9UN81	338 aa		17.62	■□□□□ 0.41
PRKAR1A-206	ENST00000585460	PCDHB13	Q9Y5F0	798 aa		17.62	■□□□□ 0.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms