RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MAFBQ9Y5Q3 323 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-237ENST00000585163 A8MUI8 341 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 HGSO14964 777 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 KRT15P19012 456 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 BACE1P56817 501 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 OGDHQ02218 1023 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PDK4Q16654 411 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 GNPTABQ3T906 1256 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 HP1BP3Q5SSJ5 553 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SCARA3Q6AZY7 606 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TXNRD3NBQ6F5E7 133 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZBED8Q8IZ13 594 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 IMPG2Q9BZV3 1241 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NOP53Q9NZM5 478 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 GRID1Q9ULK0 1009 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 STK38LQ9Y2H1 464 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NDC80O14777 642 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ASS1P00966 412 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 EDN1P05305 212 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CDKN2BP42772 138 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PIGHQ14442 188 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PPP1R15BQ5SWA1 713 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DNAJC24Q6P3W2 148 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CENPUQ71F23 418 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SPOCK2Q92563 424 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 MYLK2Q9H1R3 596 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ETNK1Q9HBU6 452 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 PCDH9Q9HC56 1237 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TXLNGQ9NUQ3 528 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SLC24A2Q9UI40 661 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ADAMTS5Q9UNA0 930 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 USH1CQ9Y6N9 552 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RLFQ13129 1914 aa14.97□□□□□ -0.01
CDK5RAP3-237ENST00000585163 IRF6O14896 467 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TYROBPO43914 113 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 OATP04181 439 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RPSAP08865 295 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 GBP2P32456 591 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 RPA3P35244 121 aaPredicted RBP14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SP2Q02086 613 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SETDB1Q15047 1291 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DCUN1D2Q6PH85 259 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 C4orf33Q8N1A6 199 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 NIPA2Q8N8Q9 360 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 TMEM121Q9BTD3 319 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 SLCO1B3Q9NPD5 702 aa14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 DDX56Q9NY93 547 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-237ENST00000585163 EDF1O60869 148 aaKnown RBP14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ATP5HO75947 161 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ATG7O95352 703 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CST3P01034 146 aaPredicted RBP14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TGFB2P61812 414 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LACTBP83111 547 aaPredicted RBP14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TAP1Q03518 808 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SEZ6Q53EL9 994 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TMEM35BQ8NCS4 154 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC35B2Q8TB61 432 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC7A3Q8WY07 619 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RSRC1Q96IZ7 334 aaKnown RBP14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LRRC37BQ96QE4 947 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF518BQ9C0D4 1074 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TMEM134Q9H6X4 195 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ZNF302Q9NR11 478 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CHKBQ9Y259 395 aa14.96□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LRRD1A4D1F6 860 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SGK1O00141 431 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EGFRP00533 1210 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CA4P22748 312 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 AP3M2P53677 418 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PDIA2Q13087 525 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 CAPN12Q6ZSI9 719 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ACSF2Q96CM8 615 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ERP27Q96DN0 273 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 RAB3IPQ96QF0 476 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LRMDAQ9H2I8 198 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PSMC3IPQ9P2W1 217 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FARP1Q9Y4F1 1045 aaPredicted RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 ATP11AP98196 1134 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PLCB3Q01970 1234 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 TMEM132BQ14DG7 1078 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 SLC1A5Q15758 541 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EFHC2Q5JST6 749 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 BRSK2Q8IWQ3 736 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 WDTC1Q8N5D0 677 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 LRRC8CQ8TDW0 803 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 UTP4Q969X6 686 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 NIFKQ9BYG3 293 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 PRDM16Q9HAZ2 1276 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 FETUBQ9UGM5 382 aa14.95□□□□□ -0.02
CDK5RAP3-237ENST00000585163 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 IFNB1P01574 187 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 KCNA3P22001 575 aa14.94□□□□□ -0.02
CDK5RAP3-237ENST00000585163 EIF4BP23588 611 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms