RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 LDHAP00338 332 aaKnown RBP22.01■■□□□ 1.11
TOP3A-219ENST00000584887 KRT19P08727 400 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 CCNE1P24864 410 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 KIAA2013Q8IYS2 634 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 C1orf127Q8N9H9 656 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 TTC8Q8TAM2 541 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 SPPL2BQ8TCT7 592 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 BORCS6Q96GS4 357 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 LMAN1LQ9HAT1 526 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 PDE11AQ9HCR9 933 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 TRPV5Q9NQA5 729 aa22.01■■□□□ 1.11
TOP3A-219ENST00000584887 MORC2Q9Y6X9 1032 aaPredicted RBP22.01■■□□□ 1.11
TOP3A-219ENST00000584887 FRMD3A2A2Y4 597 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 EXTL3O43909 919 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 HUS1O60921 280 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 HAPLN1P10915 354 aaPredicted RBP22■■□□□ 1.11
TOP3A-219ENST00000584887 CDC25CP30307 473 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 SOX9P48436 509 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 FZD5Q13467 585 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 STXBP4Q6ZWJ1 553 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 PDCL2Q8N4E4 241 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 CSGALNACT2Q8N6G5 542 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 LINC00301Q8NCQ3 95 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 C2orf15Q8WU43 125 aaKnown RBP22■■□□□ 1.11
TOP3A-219ENST00000584887 HPS3Q969F9 1004 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 DHX58Q96C10 678 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 ZFYVE19Q96K21 471 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 ZNF396Q96N95 335 aaPredicted RBP22■■□□□ 1.11
TOP3A-219ENST00000584887 MKNK1Q9BUB5 465 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 CHRDQ9H2X0 955 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 TMEM206Q9H813 350 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 ZSCAN32Q9NX65 697 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 PCDHB5Q9Y5E4 795 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 PCDHGA2Q9Y5H1 932 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 COL4A2P08572 1712 aa22■■□□□ 1.11
TOP3A-219ENST00000584887 CHADO15335 359 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 PRAMEF12O95522 483 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 TMEM191BP0C7N4 346 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 ID4P47928 161 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 ASIC1P78348 528 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 SMARCB1Q12824 385 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 FOXD4L6Q3SYB3 417 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 LMBRD2Q68DH5 695 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 FOXD4L3Q6VB84 417 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 DCLK2Q8N568 766 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 GLIS3Q8NEA6 775 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 RUBCNQ92622 972 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 PI4K2AQ9BTU6 479 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 MTMR12Q9C0I1 747 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 SMG9Q9H0W8 520 aaKnown RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 TASP1Q9H6P5 420 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 PRMT8Q9NR22 394 aaPredicted RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 TMLHEQ9NVH6 421 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 ITGA11Q9UKX5 1188 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 L1RE1Q9UN81 338 aa21.99■■□□□ 1.11
TOP3A-219ENST00000584887 R3HCC1Q9Y3T6 440 aaKnown RBP21.99■■□□□ 1.11
TOP3A-219ENST00000584887 ARNTLO00327 626 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 PRPF40AO75400 957 aaKnown RBP21.98■■□□□ 1.11
TOP3A-219ENST00000584887 ACAT1P24752 427 aaKnown RBP21.98■■□□□ 1.11
TOP3A-219ENST00000584887 GPR15P49685 360 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 FCHO2Q0JRZ9 810 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 ZNF687Q8N1G0 1237 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 GPD1LQ8N335 351 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 STKLD1Q8NE28 680 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 LRRC3BQ96PB8 259 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 LRRC27Q9C0I9 530 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 TNMDQ9H2S6 317 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 IL21Q9HBE4 155 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 DDX43Q9NXZ2 648 aaKnown RBP21.98■■□□□ 1.11
TOP3A-219ENST00000584887 NCDNQ9UBB6 729 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 MAGED2Q9UNF1 606 aaPredicted RBP21.98■■□□□ 1.11
TOP3A-219ENST00000584887 SNX9Q9Y5X1 595 aa21.98■■□□□ 1.11
TOP3A-219ENST00000584887 RBP5P82980 135 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 MYL7Q01449 175 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 ARHGAP29Q52LW3 1261 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 SDHAF4Q5VUM1 108 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 SCARA3Q6AZY7 606 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 LRRC52Q8N7C0 313 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 SUMF1Q8NBK3 374 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 BPIFB1Q8TDL5 484 aa21.97■■□□□ 1.11
TOP3A-219ENST00000584887 C8orf33Q9H7E9 229 aaPredicted RBP21.97■■□□□ 1.11
TOP3A-219ENST00000584887 HSP90AA1P07900 732 aaKnown RBP21.96■■□□□ 1.11
TOP3A-219ENST00000584887 NFE2Q16621 373 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-219ENST00000584887 ADGRF2Q8IZF7 708 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 MSANTD3Q96H12 275 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 ANKRD36BP1Q96IX9 119 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 RBM12Q9NTZ6 932 aaKnown RBP21.96■■□□□ 1.11
TOP3A-219ENST00000584887 OBP2AQ9NY56 170 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 GTSE1Q9NYZ3 720 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 SIX4Q9UIU6 781 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 MYO15AQ9UKN7 3530 aa21.96■■□□□ 1.11
TOP3A-219ENST00000584887 NUP210Q8TEM1 1887 aaPredicted RBP21.96■■□□□ 1.11
TOP3A-219ENST00000584887 ZNF292O60281 2723 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 SPECC1L-ADORA2AF8WAN1 911 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 PPP6R2O75170 966 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 TNNC2P02585 160 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 CHRNB1P11230 501 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 CCR3P51677 355 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 AMPD3Q01432 767 aa21.95■■□□□ 1.1
TOP3A-219ENST00000584887 LRRC32Q14392 662 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms