RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 PDSS2Q86YH6 399 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 FAM9AQ8IZU1 332 aaPredicted RBP3.83□□□□□ -1.8
VAPA-208ENST00000584796 AOPEPQ8N6M6 819 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 CNTD1Q8N815 330 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 ZNF366Q8N895 744 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 VGLL2Q8N8G2 317 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 SLC17A8Q8NDX2 589 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 ATL2Q8NHH9 583 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 SCAMP4Q969E2 229 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 TRIB1Q96RU8 372 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 OSBPL9Q96SU4 736 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 PUS7LQ9H0K6 701 aaKnown RBP3.83□□□□□ -1.8
VAPA-208ENST00000584796 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.83□□□□□ -1.8
VAPA-208ENST00000584796 PCDHB1Q9Y5F3 818 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.83□□□□□ -1.8
VAPA-208ENST00000584796 ZNF804BA4D1E1 1349 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 HECW1Q76N89 1606 aa3.83□□□□□ -1.8
VAPA-208ENST00000584796 SUPT6HQ7KZ85 1726 aaKnown RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 ARHGEF12Q9NZN5 1544 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 A0A0B4J269 797 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 TTLL1O95922 423 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 RHOP08100 348 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 LPOP22079 712 aaPredicted RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 PCSK6P29122 969 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 CTGFP29279 349 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 IARSP41252 1262 aaKnown RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 EIF2B5Q13144 721 aaKnown RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 TUBB3Q13509 450 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 IL10RAQ13651 578 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 SUMO4Q6EEV6 95 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 ZNF782Q6ZMW2 699 aaPredicted RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 GADL1Q6ZQY3 521 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 C1orf162Q8NEQ5 155 aaPredicted RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 NSUN6Q8TEA1 469 aaKnown RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 CLPTM1LQ96KA5 538 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 SMOQ99835 787 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 RLIMQ9NVW2 624 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 SIDT1Q9NXL6 827 aaKnown RBP3.82□□□□□ -1.8
VAPA-208ENST00000584796 ETAA1Q9NY74 926 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 SERGEFQ9UGK8 458 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 PADI4Q9UM07 663 aa3.82□□□□□ -1.8
VAPA-208ENST00000584796 STRCP1A6NGW2 1772 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 ZMYM4Q5VZL5 1548 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 ATP10BO94823 1461 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 CCDC154A6NI56 674 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 TARM1B6A8C7 271 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 NT5C1B-RDH14C9J2C7 533 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 TP73O15350 636 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA12O60330 932 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 NDUFV1P49821 464 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 CCT8P50990 548 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 TCF15Q12870 199 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 ZNF626Q68DY1 528 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PPP4R3AQ6IN85 833 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 C11orf87Q6NUJ2 197 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PGM2L1Q6PCE3 622 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 NECAB2Q7Z6G3 386 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 FAM109AQ8N4B1 249 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 CAMKK1Q8N5S9 505 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 SEMA4CQ9C0C4 833 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 TMX1Q9H3N1 280 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 SERTAD4Q9NUC0 356 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 MKS1Q9NXB0 559 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 SLC5A4Q9NY91 659 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 EHD3Q9NZN3 535 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PRKAB1Q9Y478 270 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA9Q9Y5G4 932 aaKnown RBP3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA8Q9Y5G5 932 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA7Q9Y5G6 932 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA6Q9Y5G7 932 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 PCDHGA3Q9Y5H0 932 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 LRRIQ1Q96JM4 1722 aa3.81□□□□□ -1.8
VAPA-208ENST00000584796 ZFYVE16Q7Z3T8 1539 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 CARMIL1Q5VZK9 1371 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 F5H697 171 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 FZD9O00144 591 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 F2RL2O00254 374 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 POLRMTO00411 1230 aaKnown RBP3.8□□□□□ -1.8
VAPA-208ENST00000584796 TRIAP1O43715 76 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 CHEK2O96017 543 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 HNRNPCP07910 306 aaKnown RBP eCLIP3.8□□□□□ -1.81e-7■■□□□ 14.4
VAPA-208ENST00000584796 PRR35P0CG20 571 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 NR2F6P10588 404 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 ZFXP17010 805 aaPredicted RBP3.8□□□□□ -1.8
VAPA-208ENST00000584796 KRT85P78386 507 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 GRM1Q13255 1194 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 CCDC93Q567U6 631 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 MTX3Q5HYI7 312 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 KAT5Q92993 513 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 FKBP10Q96AY3 582 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 COA7Q96BR5 231 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 TPSD1Q9BZJ3 242 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 AMBRA1Q9C0C7 1298 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 MCM8Q9UJA3 840 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 BTBD3Q9Y2F9 522 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 NR2E3Q9Y5X4 410 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 CFAP20Q9Y6A4 193 aaKnown RBP3.8□□□□□ -1.8
VAPA-208ENST00000584796 SRCAPQ6ZRS2 3230 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 ABCA6Q8N139 1617 aa3.8□□□□□ -1.8
VAPA-208ENST00000584796 ARID4BQ4LE39 1312 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms