RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 OVOL3O00110 214 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 MGST3O14880 152 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 CTNND1O60716 968 aaKnown RBP4.58□□□□□ -1.68
VAPA-206ENST00000583475 TUSC2O75896 110 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 SCGB1D2O95969 90 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 MYBP10242 640 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 PIM1P11309 404 aaPredicted RBP4.58□□□□□ -1.68
VAPA-206ENST00000583475 CHRM3P20309 590 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 NDUFV1P49821 464 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 AGFG1P52594 562 aaKnown RBP4.58□□□□□ -1.68
VAPA-206ENST00000583475 PPP2R5AQ15172 486 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 ERCC6LQ2NKX8 1250 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 KAZNQ674X7 775 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 OVCH2Q7RTZ1 564 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 FAM98AQ8NCA5 519 aaKnown RBP4.58□□□□□ -1.68
VAPA-206ENST00000583475 ZBTB34Q8NCN2 500 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 TOR1AIP2Q8NFQ8 470 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 MYCBPAPQ8TBZ2 947 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 CAGE1Q8TC20 777 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 ACTRT2Q8TDY3 377 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 JDP2Q8WYK2 163 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 RUNDC1Q96C34 613 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 MTFMTQ96DP5 389 aaKnown RBP4.58□□□□□ -1.68
VAPA-206ENST00000583475 FBXL20Q96IG2 436 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 PGBD1Q96JS3 809 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 NT5C1BQ96P26 610 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 OSBPL9Q96SU4 736 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 HEPHQ9BQS7 1158 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 STAP2Q9UGK3 403 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 CPA4Q9UI42 421 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 RAD54BQ9Y620 910 aa4.58□□□□□ -1.68
VAPA-206ENST00000583475 WDR27A2RRH5 827 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 ADM5C9JUS6 153 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 DCLK1O15075 740 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 TRIAP1O43715 76 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 SOAT2O75908 522 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 ELFN1P0C7U0 828 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 GCLCP48506 637 aaPredicted RBP4.57□□□□□ -1.68
VAPA-206ENST00000583475 NXPH1P58417 271 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 STRIP1Q5VSL9 837 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 NXNQ6DKJ4 435 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 NPNTQ6UXI9 565 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 DAAM2Q86T65 1068 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 COL23A1Q86Y22 540 aaPredicted RBP4.57□□□□□ -1.68
VAPA-206ENST00000583475 TCEAL8Q8IYN2 117 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 FAM109AQ8N4B1 249 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 PCSK9Q8NBP7 692 aaKnown RBP4.57□□□□□ -1.68
VAPA-206ENST00000583475 TFAP2BQ92481 460 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 HESX1Q9UBX0 185 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 TLK1Q9UKI8 766 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 G3BP2Q9UN86 482 aaKnown RBP4.57□□□□□ -1.68
VAPA-206ENST00000583475 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 INSL6Q9Y581 213 aa4.57□□□□□ -1.68
VAPA-206ENST00000583475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.682e-12■■□□□ 12.6
VAPA-206ENST00000583475 ADGRA2Q96PE1 1338 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 TSPAN6O43657 245 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 UNC5CO95185 931 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 CHRM2P08172 466 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 U2AF1L5P0DN76 240 aaPredicted RBP4.56□□□□□ -1.68
VAPA-206ENST00000583475 ITGALP20701 1170 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 KCNJ5P48544 419 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 ZNF134P52741 427 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 ARFIP2P53365 341 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 MAPK10P53779 464 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 CACNA2D1P54289 1103 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 U2AF1Q01081 240 aaKnown RBP eCLIP4.56□□□□□ -1.681e-9■■□□□ 13.1
VAPA-206ENST00000583475 ITIH3Q06033 890 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 NBPF8Q3BBV2 869 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 MINDY4Q4G0A6 757 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 ANO6Q4KMQ2 910 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 AMOTQ4VCS5 1084 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 RBM20Q5T481 1227 aaKnown RBP4.56□□□□□ -1.68
VAPA-206ENST00000583475 VPS53Q5VIR6 699 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 FBXO42Q6P3S6 717 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 PRIMA1Q86XR5 153 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.56□□□□□ -1.68
VAPA-206ENST00000583475 MAGEB6Q8N7X4 407 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 B3GALNT2Q8NCR0 500 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 SLC46A1Q96NT5 459 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 CRAMP1Q96RY5 1269 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 P2RX7Q99572 595 aaKnown RBP4.56□□□□□ -1.68
VAPA-206ENST00000583475 DUSP26Q9BV47 211 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 SPATA5L1Q9BVQ7 753 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 R3HDMLQ9H3Y0 253 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 ATP6V0A4Q9HBG4 840 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 KLC4Q9NSK0 619 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 PIH1D1Q9NWS0 290 aaKnown RBP4.56□□□□□ -1.68
VAPA-206ENST00000583475 PLEKHM1Q9Y4G2 1056 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 PCSK5Q92824 1860 aa4.56□□□□□ -1.68
VAPA-206ENST00000583475 THP07101 528 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 GRPP07492 148 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 NPR1P16066 1061 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 GRIA3P42263 894 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 GPSM2P81274 684 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 TXNRD1Q16881 649 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 LONRF3Q496Y0 759 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 TMEM108Q6UXF1 575 aa4.55□□□□□ -1.68
VAPA-206ENST00000583475 PEG10Q86TG7 708 aaKnown RBP4.55□□□□□ -1.68
VAPA-206ENST00000583475 ADGRG3Q86Y34 549 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms