RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 ITFG1Q8TB96 612 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 SCARF2Q96GP6 870 aaPredicted RBP8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 CEP170P1Q96L14 293 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 CLSTN3Q9BQT9 956 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 TRIM56Q9BRZ2 755 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 RHOBTB2Q9BYZ6 727 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 IRF2BPLQ9H1B7 796 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 SOX17Q9H6I2 414 aaPredicted RBP8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 OSGEPQ9NPF4 335 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 GPRC5CQ9NQ84 441 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 SH3GLB2Q9NR46 395 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 MRPL17Q9NRX2 175 aaKnown RBP8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 WNT16Q9UBV4 365 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 TCEAL9Q9UHQ7 104 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 FBXL21Q9UKT6 434 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 ATG2BQ96BY7 2078 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 CFAP47Q6ZTR5 3102 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 CNTNAP2Q9UHC6 1331 aa8.75□□□□□ -1.01
PPP4R1-225ENST00000583438 NUP210Q8TEM1 1887 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 CCDC196A0A1B0GTZ2 297 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 DDX3YO15523 660 aaKnown RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 MEFVO15553 781 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 SLITRK3O94933 977 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 GLUD1P00367 558 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 URODP06132 367 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 FDPSP14324 419 aaKnown RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 CD72P21854 359 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 YWHABP31946 246 aaKnown RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 PTENP60484 403 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 RAC1P63000 192 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 GPC5P78333 572 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 GSTM4Q03013 218 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 GIT2Q14161 759 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 KRT32Q14532 448 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 SLC5A9Q2M3M2 681 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 FOXD4L6Q3SYB3 417 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 FOXD4L3Q6VB84 417 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 SRGAP1Q7Z6B7 1085 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 C4orf19Q8IY42 314 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 URGCPQ8TCY9 931 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 BICD2Q8TD16 824 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 CCDC12Q8WUD4 166 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 PSPC1Q8WXF1 523 aaKnown RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 ACSF2Q96CM8 615 aaPredicted RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 PLA2G2FQ9BZM2 168 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 CEP44Q9C0F1 390 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 SRA1Q9HD15 236 aaKnown RBP8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 ARHGEF3Q9NR81 526 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 KCNK4Q9NYG8 393 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 IGSF9Q9P2J2 1179 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 FBXW11Q9UKB1 542 aa8.74□□□□□ -1.01
PPP4R1-225ENST00000583438 FRYQ5TBA9 3013 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 SPAG17Q6Q759 2223 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ADAM11O75078 769 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 KRT37O76014 449 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 NPTXRO95502 500 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ALDH2P05091 517 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 HMGB1P09429 215 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ITGA4P13612 1032 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 TGM1P22735 817 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ARL2P36404 184 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ARL4DP49703 201 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 FANCCQ00597 558 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 NONOQ15233 471 aaKnown RBP eCLIP8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 EEF1DP3Q658K8 133 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 NCAPH2Q6IBW4 605 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 RUFY3Q7L099 469 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 SV2BQ7L1I2 683 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 ERMP1Q7Z2K6 904 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 GRASPQ7Z6J2 395 aaPredicted RBP8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 MAP4K3Q8IVH8 894 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 STK35Q8TDR2 534 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 PGBD4Q96DM1 585 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 HSD17B14Q9BPX1 270 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 KXD1Q9BQD3 176 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 RTP3Q9BQQ7 232 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 DDX23Q9BUQ8 820 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 NRSN2Q9GZP1 204 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 CSRNP2Q9H175 543 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 POLD4Q9HCU8 107 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 SLC2A4RGQ9NR83 387 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 NOP53Q9NZM5 478 aaKnown RBP8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 GREB1Q4ZG55 1949 aa8.73□□□□□ -1.01
PPP4R1-225ENST00000583438 CASTOR2A6NHX0 329 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 SCAMP3O14828 347 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 DEXIO95424 95 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 LMNAP02545 664 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 SPATA31C1P0DKV0 1188 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 CD68P34810 354 aaPredicted RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 DNM2P50570 870 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 STARD6P59095 220 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 PPP2R3AQ06190 1150 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 SSRP1Q08945 709 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 SNW1Q13573 536 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 EPHA7Q15375 998 aa8.72□□□□□ -1.01
PPP4R1-225ENST00000583438 XKR9Q5GH70 373 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms