RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 HSP90AA4PQ58FG1 418 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 DHX40Q8IX18 779 aaKnown RBP23.15■■□□□ 1.3
TSEN54-208ENST00000583173 ATXN2LQ8WWM7 1075 aaKnown RBP23.15■■□□□ 1.3
TSEN54-208ENST00000583173 TUBGCP2Q9BSJ2 902 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 CRISPLD1Q9H336 500 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 CYP3A43Q9HB55 503 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.15■■□□□ 1.3
TSEN54-208ENST00000583173 THEGQ9P2T0 379 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 CD207Q9UJ71 328 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 PLXNA3P51805 1871 aa23.15■■□□□ 1.3
TSEN54-208ENST00000583173 ATP2C2O75185 946 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 WEE2P0C1S8 567 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 SRGAP2BP0DMP2 458 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 P4HA1P13674 534 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 ACAT1P24752 427 aaKnown RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 MTIF2P46199 727 aaKnown RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 ADCY1Q08828 1119 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 MAN2A1Q16706 1144 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 INTS6LQ5JSJ4 861 aaKnown RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 EP400NLQ6ZTU2 488 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 CREBRFQ8IUR6 639 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 SUSD6Q92537 303 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 ZNF707Q96C28 371 aaPredicted RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 NIF3L1Q9GZT8 377 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 NAT10Q9H0A0 1025 aaKnown RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 ADAM7Q9H2U9 754 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 ZDHHC7Q9NXF8 308 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 HSFX1Q9UBD0 423 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 CDH9Q9ULB4 789 aa23.14■■□□□ 1.29
TSEN54-208ENST00000583173 MTCL1Q9Y4B5 1905 aaKnown RBP23.14■■□□□ 1.29
TSEN54-208ENST00000583173 MYBPHLA2RUH7 354 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 GTPBP10A4D1E9 387 aaKnown RBP23.13■■□□□ 1.29
TSEN54-208ENST00000583173 MTMR11A4FU01 709 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 GRXCR2A6NFK2 248 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 RFPL2O75678 378 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 PDGFRBP09619 1106 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 PCSK1P29120 753 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 HOXA9P31269 272 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 RAP1GAPP47736 663 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 ZNF165P49910 485 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 SMARCB1Q12824 385 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 VWA3BQ502W6 1294 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 WDR44Q5JSH3 913 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 DPY19L2P1Q6NXN4 242 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 DCP1BQ8IZD4 617 aaKnown RBP23.13■■□□□ 1.29
TSEN54-208ENST00000583173 ATAD1Q8NBU5 361 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 OR6B3Q8NGW1 331 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 WHAMMQ8TF30 809 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 IMPG2Q9BZV3 1241 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 SFXN1Q9H9B4 322 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 CRTAC1Q9NQ79 661 aa23.13■■□□□ 1.29
TSEN54-208ENST00000583173 MAGEC2Q9UBF1 373 aaPredicted RBP23.13■■□□□ 1.29
TSEN54-208ENST00000583173 CCDC195A0A1B0GUA6 201 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 MBTPS2O43462 519 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 POU2F2P09086 479 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 CPB1P15086 417 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 ITIH3Q06033 890 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 INCA1Q0VD86 236 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 SLC39A12Q504Y0 691 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 CYP26C1Q6V0L0 522 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 APTXQ7Z2E3 356 aaKnown RBP23.12■■□□□ 1.29
TSEN54-208ENST00000583173 GPR149Q86SP6 731 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 CRYBG2Q8N1P7 616 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 AOPEPQ8N6M6 819 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 CCDC150Q8NCX0 1101 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 SNX25Q9H3E2 840 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 NDST4Q9H3R1 872 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 LIMA1Q9UHB6 759 aaKnown RBP23.12■■□□□ 1.29
TSEN54-208ENST00000583173 GTF3C4Q9UKN8 822 aa23.12■■□□□ 1.29
TSEN54-208ENST00000583173 C8AP07357 584 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 HNRNPA1P09651 372 aaKnown RBP eCLIP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 BMP1P13497 986 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 PTPN1P18031 435 aaKnown RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 MRPS5P82675 430 aaKnown RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 TSPY1Q01534 308 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 CETN1Q12798 172 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 DUSP4Q13115 394 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 SMAD4Q13485 552 aaKnown RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 KRT31Q15323 416 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 CLUL1Q15846 466 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 CCDC142Q17RM4 750 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 RARS2Q5T160 578 aaKnown RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 SCARA5Q6ZMJ2 495 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 CCDC149Q6ZUS6 474 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 UNC93AQ86WB7 457 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 UBR7Q8N806 425 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 C2orf15Q8WU43 125 aaKnown RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 PGLYRP2Q96PD5 576 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 LPIN3Q9BQK8 851 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 SYT15Q9BQS2 421 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 PRKD2Q9BZL6 878 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 DPEP3Q9H4B8 488 aa23.11■■□□□ 1.29
TSEN54-208ENST00000583173 FAM124BQ9H5Z6 455 aaPredicted RBP23.11■■□□□ 1.29
TSEN54-208ENST00000583173 PUS10Q3MIT2 529 aaKnown RBP23.1■■□□□ 1.29
TSEN54-208ENST00000583173 PHLDB3Q6NSJ2 640 aa23.1■■□□□ 1.29
TSEN54-208ENST00000583173 TMC5Q6UXY8 1006 aa23.1■■□□□ 1.29
TSEN54-208ENST00000583173 TTC9BQ8N6N2 239 aa23.1■■□□□ 1.29
TSEN54-208ENST00000583173 SLC7A14Q8TBB6 771 aa23.1■■□□□ 1.29
TSEN54-208ENST00000583173 MYCBPAPQ8TBZ2 947 aa23.1■■□□□ 1.29
TSEN54-208ENST00000583173 ASB2Q96Q27 587 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms