RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SATB2	Q9UPW6	733 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	HDAC5	Q9UQL6	1122 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	PCDHGA7	Q9Y5G6	932 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	INSL5	Q9Y5Q6	135 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	SNX11	Q9Y5W9	270 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	BACE2	Q9Y5Z0	518 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	RYR1	P21817	5038 aa		5.6	□□□□□ -1.51
MSI2-216	ENST00000582772	ABCA4	P78363	2273 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772		A0A1B0GTQ1	180 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PALM3	A6NDB9	673 aa	Predicted RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772		H0Y8X5	98 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CCER2	I3L3R5	266 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	HBP1	O60381	514 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	TSPAN3	O60637	253 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	JAK2	O60674	1132 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ADAM23	O75077	832 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PRDM1	O75626	825 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ITGA2B	P08514	1039 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PDHB	P11177	359 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ATF2	P15336	505 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	U2AF2	P26368	475 aa	Known RBP eCLIP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CTSK	P43235	329 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	GPC3	P51654	580 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	NLRP11	P59045	1033 aa	Known RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ZNF543	Q08ER8	600 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	SRSF6	Q13247	344 aa	Known RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	LONRF3	Q496Y0	759 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	SLC8B1	Q6J4K2	584 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	HS6ST3	Q8IZP7	471 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ELMOD1	Q8N336	334 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ARL14	Q8N4G2	192 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CCDC33	Q8N5R6	958 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ALLC	Q8N6M5	410 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	TXNDC5	Q8NBS9	432 aa	Known RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PRR7	Q8TB68	274 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CPT1C	Q8TCG5	803 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	SAP25	Q8TEE9	199 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CHMP4C	Q96CF2	233 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PPP1R16B	Q96T49	567 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	AZI2	Q9H6S1	392 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CD248	Q9HCU0	757 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PTPRH	Q9HD43	1115 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	IL17RB	Q9NRM6	502 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	CEP72	Q9P209	647 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PCDHB2	Q9Y5E7	798 aa		5.59	□□□□□ -1.51
MSI2-216	ENST00000582772	PTPRC	P08575	1304 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	TRRAP	Q9Y4A5	3859 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	PRR19	A6NJB7	356 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	MEI4	A8MW99	385 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	YKT6	O15498	198 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	NDUFS2	O75306	463 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CS	O75390	466 aa	Known RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	BCAR3	O75815	825 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	PARP1	P09874	1014 aa	Known RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	LIPC	P11150	499 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	MYL4	P12829	197 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	BPI	P17213	487 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	ART1	P52961	327 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	TFAP4	Q01664	338 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	ELAVL2	Q12926	359 aa	Known RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	PDGFRL	Q15198	375 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CDC37	Q16543	378 aa	Predicted RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	STXBP5	Q5T5C0	1151 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	SFMBT2	Q5VUG0	894 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	TRIM68	Q6AZZ1	485 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	NAGS	Q8N159	534 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	PGBD3	Q8N328	593 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CPA6	Q8N4T0	437 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	NSUN7	Q8NE18	718 aa	Known RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CHDH	Q8NE62	594 aa	Predicted RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	GPATCH3	Q96I76	525 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CDHR1	Q96JP9	859 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	ZNF512	Q96ME7	567 aa	Predicted RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	SLC12A9	Q9BXP2	914 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	SEMA6C	Q9H3T2	930 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	ECT2	Q9H8V3	914 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	MAFF	Q9ULX9	164 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	ANKRD6	Q9Y2G4	727 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	FARP1	Q9Y4F1	1045 aa	Predicted RBP	5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	MAP4K5	Q9Y4K4	846 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	CDY1	Q9Y6F8	540 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	SLC4A4	Q9Y6R1	1079 aa		5.58	□□□□□ -1.52
MSI2-216	ENST00000582772	DOCK9	Q9BZ29	2069 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	IGKV6D-21	A0A0A0MT36	114 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772		A0A1W2PRU2	124 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ARL5C	A6NH57	179 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	PRRG1	O14668	218 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	APAF1	O14727	1248 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	CYP26A1	O43174	497 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	SRGAP3	O43295	1099 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	KLF8	O95600	359 aa	Predicted RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ARSA	P15289	507 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	WT1	P19544	449 aa	Predicted RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	FGFR3	P22607	806 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	SFPQ	P23246	707 aa	Known RBP eCLIP	5.57	□□□□□ -1.52	4e-6	■■■□□ 15.5
MSI2-216	ENST00000582772	SSTR2	P30874	369 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ADD2	P35612	726 aa		5.57	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms