RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 C12orf50Q8NA57 414 aaPredicted RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 ERP44Q9BS26 406 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 CELF4Q9BZC1 486 aaKnown RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 RNF40O75150 1001 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 GNAT1P11488 350 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 HSPA9P38646 679 aaKnown RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 GUCY2FP51841 1108 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 YARSP54577 528 aaKnown RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 DRG2P55039 364 aaKnown RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 C2CD6Q53TS8 623 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 PHLDB2Q86SQ0 1253 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 TSEN2Q8NCE0 465 aaKnown RBP24.01■■□□□ 1.43
CCDC47-204ENST00000582252 EXOC4Q96A65 974 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 HPDLQ96IR7 371 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 DPP3Q9NY33 737 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 AGAP1Q9UPQ3 857 aa24.01■■□□□ 1.43
CCDC47-204ENST00000582252 FSCN2O14926 492 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 DAPK3O43293 454 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 GPR32O75388 356 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 NPTXRO95502 500 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 FAM153BP0C7A2 387 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 MTMR3Q13615 1198 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 FAM153CQ494X1 144 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 CCSAPQ6IQ19 270 aaPredicted RBP24■■□□□ 1.43
CCDC47-204ENST00000582252 CPNE8Q86YQ8 564 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 JAMLQ86YT9 394 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 C7orf31Q8N865 590 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 SH3TC2Q8TF17 1288 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 KIF12Q96FN5 646 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 TRIM7Q9C029 511 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 PARP2Q9UGN5 583 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 FAM153AQ9UHL3 310 aa24■■□□□ 1.43
CCDC47-204ENST00000582252 AGPSO00116 658 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 MYCNP04198 464 aaPredicted RBP23.99■■□□□ 1.43
CCDC47-204ENST00000582252 ASGR1P07306 291 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 MYO1EQ12965 1108 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 KCNA10Q16322 511 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 DCUN1D2Q6PH85 259 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 CCDC137Q6PK04 289 aaKnown RBP23.99■■□□□ 1.43
CCDC47-204ENST00000582252 CXorf38Q8TB03 319 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 HOMER3Q9NSC5 361 aa23.99■■□□□ 1.43
CCDC47-204ENST00000582252 C17orf102A2RUQ5 167 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 MEFVO15553 781 aaPredicted RBP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 CILPO75339 1184 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 DARSP14868 501 aaKnown RBP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 ECHS1P30084 290 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 RAP1GAPP47736 663 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 RAD23BP54727 409 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 ADAM17P78536 824 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 DMTNQ08495 405 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 DUPD1Q68J44 220 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 KATNAL2Q8IYT4 538 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 C3orf20Q8ND61 904 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 TFAP2BQ92481 460 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 DDX27Q96GQ7 796 aaKnown RBP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 TMEM176AQ96HP8 235 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 LRRC19Q9H756 370 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 PSD3Q9NYI0 1048 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 WDR35Q9P2L0 1181 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 ADAM21Q9UKJ8 722 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 GINS2Q9Y248 185 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 TMEM191CA6NGB0 347 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 CABYRO75952 493 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 HOXC8P31273 242 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 COILP38432 576 aaPredicted RBP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 PTPN11Q06124 597 aaPredicted RBP23.98■■□□□ 1.43
CCDC47-204ENST00000582252 TRADDQ15628 312 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 LHX8Q68G74 356 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 LLGL2Q6P1M3 1020 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 CCDC105Q8IYK2 499 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 C18orf8Q96DM3 657 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 PKNOX2Q96KN3 472 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 SH3GL2Q99962 352 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 TRIM51Q9BSJ1 452 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 FAM129AQ9BZQ8 928 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 DPH5Q9H2P9 285 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 SMYD3Q9H7B4 428 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 KIAA1257Q9ULG3 409 aa23.98■■□□□ 1.43
CCDC47-204ENST00000582252 BRCA2P51587 3418 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 VDRP11473 427 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 FGFR4P22455 802 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 PTGIRP43119 386 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 PIGHQ14442 188 aaPredicted RBP23.97■■□□□ 1.43
CCDC47-204ENST00000582252 SGO2Q562F6 1265 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 DDX42Q86XP3 938 aaKnown RBP eCLIP23.97■■□□□ 1.43
CCDC47-204ENST00000582252 BEST2Q8NFU1 509 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 EXD1Q8NHP7 514 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 OSMRQ99650 979 aa23.97■■□□□ 1.43
CCDC47-204ENST00000582252 TRIM6Q9C030 488 aaPredicted RBP23.97■■□□□ 1.43
CCDC47-204ENST00000582252 BARX2Q9UMQ3 279 aaPredicted RBP23.97■■□□□ 1.43
CCDC47-204ENST00000582252 RARAP10276 462 aa23.96■■□□□ 1.43
CCDC47-204ENST00000582252 SSR1P43307 286 aaKnown RBP23.96■■□□□ 1.43
CCDC47-204ENST00000582252 GSCP56915 257 aaPredicted RBP23.96■■□□□ 1.43
CCDC47-204ENST00000582252 TMEM62Q0P6H9 643 aa23.96■■□□□ 1.43
CCDC47-204ENST00000582252 SIX1Q15475 284 aaPredicted RBP23.96■■□□□ 1.43
CCDC47-204ENST00000582252 ZNF771Q7L3S4 317 aaPredicted RBP23.96■■□□□ 1.43
CCDC47-204ENST00000582252 CCDC50Q8IVM0 306 aa23.96■■□□□ 1.43
CCDC47-204ENST00000582252 IQCKQ8N0W5 287 aa23.96■■□□□ 1.43
CCDC47-204ENST00000582252 NME8Q8N427 588 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms