RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 APPL2Q8NEU8 664 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 MICAL1Q8TDZ2 1067 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ATOH1Q92858 354 aaPredicted RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 TTPALQ9BTX7 342 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 APOL5Q9BWW9 433 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 GPR62Q9BZJ7 368 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 IMPG2Q9BZV3 1241 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 ZBP1Q9H171 429 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 TLE6Q9H808 572 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 TMEM8AQ9HCN3 771 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 MRPL17Q9NRX2 175 aaKnown RBP14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 SIX4Q9UIU6 781 aa14.46□□□□□ -0.09
CSNK1D-220ENST00000581737 FSCN2O14926 492 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 MFAP3LO75121 409 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 STAU1O95793 577 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 TRIM21P19474 475 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 PIK3CAP42336 1068 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 CETN1Q12798 172 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 NCOA4Q13772 614 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 FIGNQ5HY92 759 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 TDRD10Q5VZ19 366 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 KRT39Q6A163 491 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 SV2AQ7L0J3 742 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 ASCL5Q7RTU5 278 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 TRIM59Q8IWR1 403 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 ZNF516Q92618 1163 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 TAF4BQ92750 862 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 HPDLQ96IR7 371 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 ERGIC2Q96RQ1 377 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 PRRX2Q99811 253 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 VN1R3Q9BXE9 311 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 NUCKS1Q9H1E3 243 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 S1PR5Q9H228 398 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 SMOC2Q9H3U7 446 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 CHST7Q9NS84 486 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 DSEQ9UL01 958 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 PYCARDQ9ULZ3 195 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 PCDHB8Q9UN66 801 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 LUC7L2Q9Y383 392 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 VWA8A3KMH1 1905 aa14.45□□□□□ -0.1
CSNK1D-220ENST00000581737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 A0A1W2PQJ5 194 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 KPNA7A9QM74 516 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 M0QZQ0 153 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 PPEF2O14830 753 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 TEX33O43247 280 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 CLSTN1O94985 981 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 C4BPAP04003 597 aaKnown RBP14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 P4HA1P13674 534 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 TYMPP19971 482 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 FGFR3P22607 806 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 CA8P35219 290 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 BRCC3P46736 316 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 GCLMP48507 274 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 DSG1Q02413 1049 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 PPP3CAQ08209 521 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 KCNC3Q14003 757 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 DUSP6Q16828 381 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 C1orf220Q5T0J3 134 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 PLPP4Q5VZY2 271 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 CD300LGQ6UXG3 332 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 C15orf39Q6ZRI6 1047 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 ANKS3Q6ZW76 656 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 IRF2BP1Q8IU81 584 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 TMTC1Q8IUR5 882 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 CXorf38Q8TB03 319 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 PIK3R5Q8WYR1 880 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 SLC35C1Q96A29 364 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 SENP8Q96LD8 212 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 EMILIN2Q9BXX0 1053 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 EDEM3Q9BZQ6 932 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 NDST4Q9H3R1 872 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 MMRN2Q9H8L6 949 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 IRAK3Q9Y616 596 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 ZDBF2Q9HCK1 2354 aa14.44□□□□□ -0.1
CSNK1D-220ENST00000581737 H7C4K7 107 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 I3L4J1 428 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 P4HA2O15460 535 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 IPO7O95373 1038 aaKnown RBP14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 CXCL14O95715 111 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 AFPP02771 609 aaKnown RBP14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 MYL7Q01449 175 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 PTPN14Q15678 1187 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 SGSM1Q2NKQ1 1148 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 ZNF699Q32M78 642 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 SYCE2Q6PIF2 218 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 CYP26C1Q6V0L0 522 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 METTL23Q86XA0 190 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 CEP57Q86XR8 500 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 FMNL3Q8IVF7 1028 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 TXLNBQ8N3L3 684 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 MRPL43Q8N983 215 aaKnown RBP14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 FBXL13Q8NEE6 735 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 SPATA18Q8TC71 538 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 RIN2Q8WYP3 895 aaPredicted RBP14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 FAM84AQ96KN4 292 aa14.43□□□□□ -0.1
CSNK1D-220ENST00000581737 CDCA3Q99618 268 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms