RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 NXPE3Q969Y0 559 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 ACSF2Q96CM8 615 aaPredicted RBP13.54□□□□□ -0.24
SNORD55-201ENST00000581525 GBP4Q96PP9 640 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 MYADMQ96S97 322 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 PIDD1Q9HB75 910 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 TMEM8AQ9HCN3 771 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
SNORD55-201ENST00000581525 NOTCH4Q99466 2003 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 ANHXE9PGG2 379 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 PRRG1O14668 218 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 DCXO43602 365 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 RHOP08100 348 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 EPB41P11171 864 aaKnown RBP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 LAMP2P13473 410 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 KRT13P13646 458 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 LMO2P25791 158 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 PLD1Q13393 1074 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 CAMK4Q16566 473 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 CFAP221Q4G0U5 840 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 SLC39A12Q504Y0 691 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 ISM2Q6H9L7 571 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 POTEHQ6S545 545 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 RBM43Q6ZSC3 357 aaKnown RBP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 FRMD5Q7Z6J6 570 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 LEMD2Q8NC56 503 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 MED15Q96RN5 788 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 EPHX3Q9H6B9 360 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 METTL14Q9HCE5 456 aaKnown RBP13.53□□□□□ -0.24
SNORD55-201ENST00000581525 TMLHEQ9NVH6 421 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 PCDHB5Q9Y5E4 795 aa13.53□□□□□ -0.24
SNORD55-201ENST00000581525 BICDL2A1A5D9 508 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 STX10O60499 249 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 GPR37L1O60883 481 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 PHACTR2O75167 634 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 MOSPD3O75425 235 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 HLA-DRAP01903 254 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 FSHRP23945 695 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 GNL1P36915 607 aaPredicted RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 MAGEA11P43364 429 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 NTHL1P78549 312 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 TSPY1Q01534 308 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 TWF1Q12792 350 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 PABPC1LQ4VXU2 614 aaKnown RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 CT47A1Q5JQC4 288 aaPredicted RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 KRT39Q6A163 491 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 TMC8Q8IU68 726 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 MLKLQ8NB16 471 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 EDAQ92838 391 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 PSMG2Q969U7 264 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 CEP295NLQ96MC4 621 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 ZNF512Q96ME7 567 aaPredicted RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.25
SNORD55-201ENST00000581525 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 IGSF9Q9P2J2 1179 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 CDH7Q9ULB5 785 aa13.52□□□□□ -0.25
SNORD55-201ENST00000581525 MYBPHLA2RUH7 354 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 BIN1O00499 593 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ZNF197O14709 1029 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 TRIM49P0CI25 452 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 TRIM49CP0CI26 452 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 CCR2P41597 374 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ALDH1A3P47895 512 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 GCLMP48507 274 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ZXDAP98168 799 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 PAK1Q13153 545 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 BIRC3Q13489 604 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 MAPRE1Q15691 268 aaKnown RBP13.51□□□□□ -0.25
SNORD55-201ENST00000581525 PTPN21Q16825 1174 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ZNF699Q32M78 642 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ZNF667Q5HYK9 610 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 CRYBG2Q8N1P7 616 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 TTC9BQ8N6N2 239 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 ITFG1Q8TB96 612 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 MYCBPAPQ8TBZ2 947 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 TAS1R2Q8TE23 839 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 NELFBQ8WX92 580 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 FGF13Q92913 245 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 SLC35C1Q96A29 364 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 PGLYRP2Q96PD5 576 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 SDCBP2Q9H190 292 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 C11orf16Q9NQ32 467 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 CRTAC1Q9NQ79 661 aa13.51□□□□□ -0.25
SNORD55-201ENST00000581525 GDE1Q9NZC3 331 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms