RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 ZSWIM1Q9BR11 485 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 GPSM2P81274 684 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 BBS7Q8IWZ6 715 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 TTC30BQ8N4P2 665 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 TBC1D19Q8N5T2 526 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 IL18RAPO95256 599 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 PRLRP16471 622 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 RAD51Q06609 339 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 GPR162Q16538 588 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 ACAD10Q6JQN1 1059 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 CCDC81Q6ZN84 652 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 METTL5Q9NRN9 209 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 AGAP1Q9UPQ3 857 aa15.16■□□□□ 0.02
CSNK1D-217ENST00000581241 GLRA3O75311 464 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 RPS6KA4O75676 772 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 CALB2P22676 271 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 FXR2P51116 673 aaKnown RBP eCLIP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SLC13A5Q86YT5 568 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SUGP1Q8IWZ8 645 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM71DQ8N9W8 422 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 ZBTB10Q96DT7 871 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 HIC2Q96JB3 615 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 STMN3Q9NZ72 180 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 THRAP10827 490 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 ACOT2P49753 483 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 MAPK7Q13164 816 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 PTK6Q13882 451 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 TMEM132DQ14C87 1099 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 WDR72Q3MJ13 1102 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 P3H2Q8IVL5 708 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 RNF149Q8NC42 400 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SLC10A4Q96EP9 437 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 HES6Q96HZ4 224 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 TFR2Q9UP52 801 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SOX6P35712 828 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 MKRN4PQ13434 485 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SCARF1Q14162 830 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 MROH9Q5TGP6 573 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 BRD8Q9H0E9 1235 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 EXOSC4Q9NPD3 245 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 GEMIN8Q9NWZ8 242 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 TAGLN3Q9UI15 199 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 PCDHB8Q9UN66 801 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 POLIQ9UNA4 740 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 PKP3Q9Y446 797 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 SESN1Q9Y6P5 492 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 DGAT1O75907 488 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 FDFT1P37268 417 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 STX5Q13190 355 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 AGBL1Q96MI9 1066 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 FAM111AQ96PZ2 611 aa15.15■□□□□ 0.02
CSNK1D-217ENST00000581241 ACADSBP45954 432 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 OVGP1Q12889 678 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 SBK1Q52WX2 424 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 DALRD3Q5D0E6 543 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 LAYNQ6UX15 382 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 TUBGCP3Q96CW5 907 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 PLEKHA8Q96JA3 519 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 TMEM245Q9H330 911 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 SYBUQ9NX95 663 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 NFIBO00712 420 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 ZBTB39O15060 712 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 EXTL3O43909 919 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 SOX11P35716 441 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 KCNJ1P48048 391 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 NUP107P57740 925 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 MAP3K20Q9NYL2 800 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 ABCC3O15438 1527 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 TRIM49D1C9J1S8 452 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 FAR2Q96K12 515 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 ANKRD27Q96NW4 1050 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 DIABLOQ9NR28 239 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 LOC100653049A0A140TA62 436 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 RASSF9O75901 435 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 KRT34O76011 436 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 PYGMP11217 842 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 SNAP23O00161 211 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 CST8O60676 142 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 HLA-DRAP01903 254 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 IMPDH2P12268 514 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 LRRC74AQ0VAA2 488 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 GTF2H3Q13889 308 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 ACBD5Q5T8D3 534 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 PAPD7Q5XG87 772 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 ARID3BQ8IVW6 561 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 V9GYQ6 96 aa15.14■□□□□ 0.01
CSNK1D-217ENST00000581241 GOLGA7BQ2TAP0 167 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms