RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MDGA1Q8NFP4 955 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 TSTD1Q8NFU3 115 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 BICD2Q8TD16 824 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 RLN3Q8WXF3 142 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 DDX12PQ92771 950 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 CNOT6LQ96LI5 555 aaKnown RBP8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 PGLYRP2Q96PD5 576 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 POLR3FQ9H1D9 316 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 KCNMB3Q9NPA1 279 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 GPRC5CQ9NQ84 441 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 PRMT7Q9NVM4 692 aaPredicted RBP8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 PILRBQ9UKJ0 227 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 TPCN1Q9ULQ1 816 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 MAFFQ9ULX9 164 aa8.43□□□□□ -1.06
SMARCE1-217ENST00000580654 LRRIQ4A6NIV6 560 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 J3QKU1 62 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 PODXLO00592 558 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 SH3BP5O60239 455 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 GJB3O75712 270 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 WFS1O76024 890 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 SLITRK3O94933 977 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CPB1P15086 417 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 GABRR2P28476 465 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 GJA4P35212 333 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 PRSS12P56730 875 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CAMK2BQ13554 666 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 PTPAQ15257 358 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 NPY5RQ15761 445 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 NTRK3Q16288 839 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 FBXO43Q4G163 708 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 XKR4Q5GH76 650 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 ANO7Q6IWH7 933 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 ZNF280DQ6N043 979 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 MOXD1Q6UVY6 613 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 DNAJB7Q7Z6W7 309 aaPredicted RBP8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 SCUBE3Q8IX30 993 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 TMEM130Q8N3G9 435 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 HDDC3Q8N4P3 179 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 MINDY1Q8N5J2 469 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 TTC9BQ8N6N2 239 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 HAS1Q92839 578 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 TATDN2Q93075 761 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 ACDQ96AP0 544 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 ZMAT2Q96NC0 199 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 P2RY13Q9BPV8 354 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 GTPBP2Q9BX10 602 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC46A2Q9BY10 475 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CCDC113Q9H0I3 377 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 TASP1Q9H6P5 420 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CAPN10Q9HC96 672 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 DDX25Q9UHL0 483 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CCL26Q9Y258 94 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 CITO14578 2027 aa8.42□□□□□ -1.06
SMARCE1-217ENST00000580654 GON4LQ3T8J9 2241 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 ANK1P16157 1881 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 TSC2P49815 1807 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 NID2Q14112 1375 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 A0A087WWV3 80 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 ARHGAP6O43182 974 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 OPHN1O60890 802 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 SOAT2O75908 522 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 CFIP05156 583 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 ITPKAP23677 461 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 P2RY2P41231 377 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 RARRES1P49788 294 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 RCAN1P53805 252 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 CYP4F3Q08477 520 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 DUSP4Q13115 394 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 PRPF4BQ13523 1007 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 HNRNPDQ14103 355 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 MAPK6Q16659 721 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 PCSK4Q6UW60 755 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 ALKAL1Q6UXT8 129 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 TOGARAM2Q6ZUX3 1019 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 LPCAT2Q7L5N7 544 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 CEP120Q8N960 986 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 LSM14AQ8ND56 463 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 CCDC148Q8NFR7 591 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 USP33Q8TEY7 942 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 BSNDQ8WZ55 320 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 PSMG2Q969U7 264 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 FAM20AQ96MK3 541 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 SLKQ9H2G2 1235 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 PRORYQ9H606 182 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 DNAAF2Q9NVR5 837 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 THG1LQ9NWX6 298 aaKnown RBP8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC6A14Q9UN76 642 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 SLC27A5Q9Y2P5 690 aa8.41□□□□□ -1.06
SMARCE1-217ENST00000580654 COL12A1Q99715 3063 aa8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 C3orf80F5H4A9 247 aa8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 ACKR2O00590 384 aa8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 ST8SIA5O15466 376 aa8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 WIPF1O43516 503 aa8.4□□□□□ -1.06
SMARCE1-217ENST00000580654 CBFA2T3O75081 653 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms