RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TTC12Q9H892 705 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TUBGCP4Q9UGJ1 667 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TBX20Q9UMR3 447 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TNFSF13BQ9Y275 285 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PCDHB9Q9Y5E1 797 aa14.37□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ARID2Q68CP9 1835 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CACNA1EQ15878 2313 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 KIF26AQ9ULI4 1882 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ASCC3Q8N3C0 2202 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OR6C75A6NL08 312 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 K7ERI5 159 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SH3BP5O60239 455 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 DTNBO60941 627 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ITPKAP23677 461 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PSMA5P28066 241 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 NMT1P30419 496 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 EFNA5P52803 228 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SPAG1Q07617 926 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 VEPH1Q14D04 833 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CALCRLQ16602 461 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 MGAT5BQ3V5L5 792 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SEZ6Q53EL9 994 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 LYSMD4Q5XG99 296 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ARMCX5Q6P1M9 558 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PADI6Q6TGC4 694 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 RASSF3Q86WH2 238 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 FBXL16Q8N461 479 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CPA6Q8N4T0 437 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 IFT74Q96LB3 600 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CNOT6LQ96LI5 555 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 FNBP1Q96RU3 617 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ECT2Q9H8V3 914 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 IL21Q9HBE4 155 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 GJB4Q9NTQ9 266 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TDP1Q9NUW8 608 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SLC6A14Q9UN76 642 aa14.36□□□□□ -0.11
CDK5RAP3-213ENST00000579605 HELZ2Q9BYK8 2649 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ARHGEF35A5YM69 484 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 LARGE1O95461 756 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 FTH1P19P0C7X4 201 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CD59P13987 128 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CYP11B2P19099 503 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 STK3Q13188 491 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PPP2R5AQ15172 486 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PDGFRLQ15198 375 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TXNDC8Q6A555 127 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 MINDY1Q8N5J2 469 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 USP33Q8TEY7 942 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ADAMTS14Q8WXS8 1223 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SPACA7Q96KW9 195 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ACO2Q99798 780 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SCUBE2Q9NQ36 999 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 DUS2Q9NX74 493 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CNTN3Q9P232 1028 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CELSR3Q9NYQ7 3312 aa14.35□□□□□ -0.11
CDK5RAP3-213ENST00000579605 M0QZQ0 153 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 REC8O95072 547 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SPATA31C1P0DKV0 1188 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 P2RY2P41231 377 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OVOS1Q6IE37 1185 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TMEM92Q6UXU6 159 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OLIG1Q8TAK6 271 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 TARS2Q9BW92 718 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 OXCT2Q9BYC2 517 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 AGXT2Q9BYV1 514 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 BCCIPQ9P287 314 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 PILRBQ9UKJ0 227 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 WNT6Q9Y6F9 365 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 BPTFQ12830 3046 aa14.34□□□□□ -0.11
CDK5RAP3-213ENST00000579605 THADAQ6YHU6 1953 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 CCDC169A6NNP5 214 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 MED24O75448 989 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 HNRNPLP14866 589 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 ATF6P18850 670 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 IFNAR2P48551 515 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 TUFMP49411 452 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 DMP1Q13316 513 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 CRY1Q16526 586 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 DUOXA1Q1HG43 343 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 SLC39A12Q504Y0 691 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 MARCH9Q86YJ5 346 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 ZBTB45Q96K62 511 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 STK24Q9Y6E0 443 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 PCNX2A6NKB5 2137 aa14.33□□□□□ -0.12
CDK5RAP3-213ENST00000579605 NUP205Q92621 2012 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 K7EQS6 105 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 C1QL1O75973 258 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 MCF2P10911 925 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 PLA2G2AP14555 144 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 EVCP57679 992 aa14.32□□□□□ -0.12
CDK5RAP3-213ENST00000579605 CYP4F3Q08477 520 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms