RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 RAD54LQ92698 747 aa20.76■□□□□ 0.91
CDKN2A-213ENST00000579122 C2orf42Q9NWW7 574 aa20.76■□□□□ 0.91
CDKN2A-213ENST00000579122 KMT2BQ9UMN6 2715 aaPredicted RBP20.76■□□□□ 0.91
CDKN2A-213ENST00000579122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ANKRD63C9JTQ0 380 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 TBCAO75347 108 aaKnown RBP20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ADRB1P08588 477 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 PLCG1P19174 1290 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 GJB2P29033 226 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 NMT1P30419 496 aaKnown RBP20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ACOT2P49753 483 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 TAF6P49848 677 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 POU5F1Q01860 360 aaKnown RBP20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 MCM6Q14566 821 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 PTPAQ15257 358 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 SLFN12LQ6IEE8 588 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 SLC46A2Q9BY10 475 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 CCSER1Q9C0I3 900 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ST6GALNAC4Q9H4F1 302 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ZHX3Q9H4I2 956 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 STYXL1Q9Y6J8 313 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 ACACBO00763 2458 aa20.75■□□□□ 0.91
CDKN2A-213ENST00000579122 HAPLN1P10915 354 aaPredicted RBP20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 LONP1P36776 959 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 TAF12Q16514 161 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 CEP68Q76N32 757 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 CMTM8Q8IZV2 173 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 GIPC2Q8TF65 315 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 TMX3Q96JJ7 454 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 PYM1Q9BRP8 204 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 DPP3Q9NY33 737 aa20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 AGO2Q9UKV8 859 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 TPRP12270 2363 aaKnown RBP20.74■□□□□ 0.91
CDKN2A-213ENST00000579122 BMP15O95972 392 aa20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 ZC2HC1CQ53FD0 456 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 LRRTM3Q86VH5 581 aa20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 DCP1BQ8IZD4 617 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 FAM160A2Q8N612 972 aaPredicted RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 RASSF8Q8NHQ8 419 aa20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 LARP4BQ92615 738 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 FAM83CQ9BQN1 747 aa20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 SMG9Q9H0W8 520 aaKnown RBP20.73■□□□□ 0.91
CDKN2A-213ENST00000579122 SOBPA7XYQ1 873 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 TISP43B9A030 160 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 DDX6P26196 483 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 SV2CQ496J9 727 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 PPM1JQ5JR12 505 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 WSCD1Q658N2 575 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 NT5DC4Q86YG4 428 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 GKN1Q9NS71 199 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 ANK1P16157 1881 aa20.72■□□□□ 0.91
CDKN2A-213ENST00000579122 KIF26AQ9ULI4 1882 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 CACNA1BQ00975 2339 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 CCDC163A0A0D9SF12 145 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 KPNA7A9QM74 516 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 EXTL3O43909 919 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 F11P03951 625 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 HMGA1P17096 107 aaKnown RBP20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 DDIT3P35638 169 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 AVPR1AP37288 418 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 CDR1P51861 262 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 RUNX3Q13761 415 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 TMEM196Q5HYL7 178 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 TMEM150AQ86TG1 271 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 HVCN1Q96D96 273 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 KIF9Q9HAQ2 790 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 HPS4Q9NQG7 708 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 ABI2Q9NYB9 513 aaPredicted RBP20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 PCDHB5Q9Y5E4 795 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 SCN1AP35498 2009 aa20.71■□□□□ 0.91
CDKN2A-213ENST00000579122 GDF9O60383 454 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 ATG13O75143 517 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 IL18RAPO95256 599 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 HOXC13P31276 330 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 NLRP12P59046 1061 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 GRIN1Q05586 938 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 GRSF1Q12849 480 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 CRELD2Q6UXH1 353 aaPredicted RBP20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 ZNF720Q7Z2F6 126 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 EFCAB13Q8IY85 973 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 KRI1Q8N9T8 703 aaKnown RBP20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 GAB3Q8WWW8 586 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 USP13Q92995 863 aaPredicted RBP20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 LOXL4Q96JB6 756 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 ZNF560Q96MR9 790 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 TDP1Q9NUW8 608 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 CCL26Q9Y258 94 aa20.7■□□□□ 0.9
CDKN2A-213ENST00000579122 TRDMT1O14717 391 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 PNPLA4P41247 253 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 AMPD2Q01433 879 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 TSPY1Q01534 308 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 BFSP1Q12934 665 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 POSTNQ15063 836 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 NFE2Q16621 373 aaPredicted RBP20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 FSTL4Q6MZW2 842 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 PKN3Q6P5Z2 889 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 CACNA2D4Q7Z3S7 1137 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 BRAPQ7Z569 592 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms