RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ADAMTS14Q8WXS8 1223 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 HAS1Q92839 578 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ZFYVE19Q96K21 471 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FCRL3Q96P31 734 aaPredicted RBP7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 HSD17B14Q9BPX1 270 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CCDC113Q9H0I3 377 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DNAJC25Q9H1X3 360 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GOLGA2P5Q9HBQ8 144 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NCOA5Q9HCD5 579 aaKnown RBP7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GDAQ9Y2T3 454 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PAXBP1Q9Y5B6 917 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CSMD1Q96PZ7 3565 aa7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 HELZP42694 1942 aaKnown RBP7.85□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PCDH15Q96QU1 1955 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SPENQ96T58 3664 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 MYO16Q9Y6X6 1858 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SMIM28A0A1B0GU29 152 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TTLL13PA6NNM8 815 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DCLK1O15075 740 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 MEFVO15553 781 aaPredicted RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 USO1O60763 962 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PRAMEF12O95522 483 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CPB1P15086 417 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 KCNE1P15382 129 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GBP1P32455 592 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GRM5P41594 1212 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NAMPTP43490 491 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 IRX4P78413 519 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SOX4Q06945 474 aaPredicted RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TNK2Q07912 1038 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 SCRN1Q12765 414 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DMC1Q14565 340 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TMEM132AQ24JP5 1023 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 USP39Q53GS9 565 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 STXBP5Q5T5C0 1151 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 EEF1DP3Q658K8 133 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ALKAL1Q6UXT8 129 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 RNF19BQ6ZMZ0 732 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GAREM2Q75VX8 874 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 RASSF3Q86WH2 238 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FMNL3Q8IVF7 1028 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TPH2Q8IWU9 490 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NECAB1Q8N987 351 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PSMG2Q969U7 264 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 CHFRQ96EP1 664 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 ZNF274Q96GC6 653 aaPredicted RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 EIF2AK1Q9BQI3 630 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 FAM83CQ9BQN1 747 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NUSAP1Q9BXS6 441 aaKnown RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 TASP1Q9H6P5 420 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 KIF9Q9HAQ2 790 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 HPS4Q9NQG7 708 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 HSFX1Q9UBD0 423 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PCDHB8Q9UN66 801 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 NUB1Q9Y5A7 615 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 F8P00451 2351 aa7.84□□□□□ -1.15
CDK5RAP3-209ENST00000578663 PLXND1Q9Y4D7 1925 aa7.84□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CITO14578 2027 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TEX51A0A1B0GUA7 166 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OR6C75A6NL08 312 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 MARCH6O60337 910 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PFKFB2O60825 505 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OAZ2O95190 189 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 DEXIO95424 95 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 BAG4O95429 457 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 VNN2O95498 520 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 EGFP01133 1207 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CDC25CP30307 473 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ALDH1A3P47895 512 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 EFNA5P52803 228 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 YARSP54577 528 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 RUNX3Q13761 415 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PPP2R5AQ15172 486 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 SPDYCQ5MJ68 293 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GPR158Q5T848 1215 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PEAR1Q5VY43 1037 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ITIH5Q86UX2 942 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 POTEDQ86YR6 584 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PNPLA1Q8N8W4 532 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TTC8Q8TAM2 541 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 DDX12PQ92771 950 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CNOT6LQ96LI5 555 aaKnown RBP7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GCNAQ96QF7 691 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CCDC94Q9BW85 323 aaPredicted RBP7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TRIM4Q9C037 500 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 GKN1Q9NS71 199 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CNTN3Q9P232 1028 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TBX20Q9UMR3 447 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 LIMCH1Q9UPQ0 1083 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OTOGQ6ZRI0 2925 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 NAV3Q8IVL0 2385 aa7.83□□□□□ -1.16
CDK5RAP3-209ENST00000578663 PHLPP2Q6ZVD8 1323 aa7.82□□□□□ -1.16
CDK5RAP3-209ENST00000578663 M0QZQ0 153 aa7.82□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CCNT1O60563 726 aaKnown RBP7.82□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
CDK5RAP3-209ENST00000578663 EDN1P05305 212 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms