RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 VAV2P52735 878 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 DEFB103AP81534 67 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 GFPT1Q06210 699 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 TIGD5Q53EQ6 642 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF394Q53GI3 561 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 SGO2Q562F6 1265 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 OTOP2Q7RTS6 562 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 KIAA1328Q86T90 577 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ACRBPQ8NEB7 543 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 OLIG1Q8TAK6 271 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 LNX1Q8TBB1 728 aaPredicted RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 PHOSPHO2Q8TCD6 241 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 SLC20A1Q8WUM9 679 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 RC3H2Q9HBD1 1191 aaKnown RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 SEPT11Q9NVA2 429 aaKnown RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 CACNG4Q9UBN1 327 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 DNAJB4Q9UDY4 337 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 PUF60Q9UHX1 559 aaKnown RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 STXBP5LQ9Y2K9 1186 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 REXO2Q9Y3B8 237 aaKnown RBP14.28□□□□□ -0.12
SRSF1-202ENST00000578430 CEP83Q9Y592 693 aa14.28□□□□□ -0.12
SRSF1-202ENST00000578430 ZBBXA8MT70 800 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 SYN3O14994 580 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 PJA2O43164 708 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 B4GALT3O60512 393 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 RTN2O75298 545 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 TADA2AO75478 443 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 GALTP07902 379 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 H2AFZP0C0S5 128 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 CD19P15391 556 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 SLC11A1P49279 550 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 ALDH7A1P49419 539 aaKnown RBP14.27□□□□□ -0.13
SRSF1-202ENST00000578430 CYP27A1Q02318 531 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 KIF5AQ12840 1032 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 CNGA2Q16280 664 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 CLEC16AQ2KHT3 1053 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 TAF3Q5VWG9 929 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 H2AFVQ71UI9 128 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 HEXIM2Q96MH2 286 aaKnown RBP14.27□□□□□ -0.13
SRSF1-202ENST00000578430 TWNKQ96RR1 684 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 SLC9A7Q96T83 725 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 ISCUQ9H1K1 167 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 LHX5Q9H2C1 402 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 ACP6Q9NPH0 428 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 ADAM28Q9UKQ2 775 aa14.27□□□□□ -0.13
SRSF1-202ENST00000578430 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 KRT86O43790 486 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 TUBB4AP04350 444 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 CYP1A1P04798 512 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 LAG3P18627 525 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 BRD2P25440 801 aaKnown RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 CDH5P33151 784 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 BCAR1P56945 870 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 BTG3Q14201 252 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 PAN2Q504Q3 1202 aaKnown RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 ARHGAP29Q52LW3 1261 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 ARHGAP17Q68EM7 881 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 ACAD10Q6JQN1 1059 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 LCLAT1Q6UWP7 414 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 REXO1L1PQ8IX06 675 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 THEM5Q8N1Q8 247 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 TMEM35BQ8NCS4 154 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 TRIM11Q96F44 468 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 LRCH3Q96II8 777 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 VCPIP1Q96JH7 1222 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 PPP1R13BQ96KQ4 1090 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 YME1L1Q96TA2 773 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 ACBD6Q9BR61 282 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.26□□□□□ -0.138e-29■□□□□ 10.9
SRSF1-202ENST00000578430 OXCT2Q9BYC2 517 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 CWH43Q9H720 699 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 TRMT1Q9NXH9 659 aaKnown RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 STK39Q9UEW8 545 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 CDH9Q9ULB4 789 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.135e-6■■□□□ 11.8
SRSF1-202ENST00000578430 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
SRSF1-202ENST00000578430 INSL6Q9Y581 213 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 SLC4A7Q9Y6M7 1214 aa14.26□□□□□ -0.13
SRSF1-202ENST00000578430 ANKRD62A6NC57 917 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 BTNL10A8MVZ5 291 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 O00370 1275 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 GJB5O95377 273 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 UNGP13051 313 aaPredicted RBP14.25□□□□□ -0.13
SRSF1-202ENST00000578430 SYN1P17600 705 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 BRCC3P46736 316 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 EPHB4P54760 987 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 CENPCQ03188 943 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 OVOS1Q6IE37 1185 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 ACOT1Q86TX2 421 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 OSTM1Q86WC4 334 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 B3GALNT2Q8NCR0 500 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 TFAP2BQ92481 460 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 RABGGTAQ92696 567 aa14.25□□□□□ -0.13
SRSF1-202ENST00000578430 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
SRSF1-202ENST00000578430 ZNF558Q96NG5 402 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms