RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 NAA15Q9BXJ9 866 aaKnown RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 INTS2Q9H0H0 1204 aaKnown RBP8.6□□□□□ -1.03
COPS3-215ENST00000578317 SIX2Q9NPC8 291 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 LRFN2Q9ULH4 789 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 MYO6Q9UM54 1294 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 CAPN11Q9UMQ6 739 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 PLAGL2Q9UPG8 496 aa8.6□□□□□ -1.03
COPS3-215ENST00000578317 ITGB3P05106 788 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 ACRP10323 421 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 FGFR1P11362 822 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 SCNN1GP51170 649 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 EPHB4P54760 987 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 PLCB3Q01970 1234 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 CCDC173Q0VFZ6 552 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 TUSC3Q13454 348 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 UPP1Q16831 310 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 GLRA4Q5JXX5 417 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 DCLRE1AQ6PJP8 1040 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 ABI1Q8IZP0 508 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 RNF169Q8NCN4 708 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 CCDC150Q8NCX0 1101 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 ZNF397Q8NF99 534 aaPredicted RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 C18orf25Q96B23 403 aaPredicted RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 ZNF689Q96CS4 500 aaPredicted RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 NT5C1BQ96P26 610 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 MRPL9Q9BYD2 267 aaKnown RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 STK33Q9BYT3 514 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 IMPG2Q9BZV3 1241 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 NUCKS1Q9H1E3 243 aaKnown RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 GANQ9H2C0 597 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 FAM207AQ9NSI2 230 aaPredicted RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 GDAP2Q9NXN4 497 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 CEP72Q9P209 647 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 AGAP1Q9UPQ3 857 aa8.59□□□□□ -1.03
COPS3-215ENST00000578317 R3HCC1Q9Y3T6 440 aaKnown RBP8.59□□□□□ -1.03
COPS3-215ENST00000578317 CAPN5O15484 640 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 LRRN2O75325 713 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 POMCP01189 267 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 GYPCP04921 128 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 ALDH2P05091 517 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 P4HA1P13674 534 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 TBXAS1P24557 533 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 POLR2BP30876 1174 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 HNRNPH3P31942 346 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 PIK3CAP42336 1068 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 AARSP49588 968 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS3-215ENST00000578317 KLK7P49862 253 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 GSDMDP57764 484 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 MYL6P60660 151 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 ZBED6P86452 979 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 TSNAXIP1Q2TAA8 658 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 OTOP2Q7RTS6 562 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 TMC6Q7Z403 805 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 LIMS2Q7Z4I7 341 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 PPFIBP1Q86W92 1011 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 FMNL3Q8IVF7 1028 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 DRC7Q8IY82 874 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 SYN2Q92777 582 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 HPDLQ96IR7 371 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.58□□□□□ -1.044e-9■■■■■ 32.8
COPS3-215ENST00000578317 LSM14BQ9BX40 385 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 CYP3A43Q9HB55 503 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 RC3H2Q9HBD1 1191 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 UBE2TQ9NPD8 197 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 TBC1D13Q9NVG8 400 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 TUBGCP4Q9UGJ1 667 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 ZMYND8Q9ULU4 1186 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 LUC7L2Q9Y383 392 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 GOLGA6L6A8MZA4 724 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 AKR1B15C9JRZ8 316 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 TMEM189-UBE2V1I3L0A0 370 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 EPHB6O15197 1021 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 DDHD2O94830 711 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 GJB5O95377 273 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 KRT19P08727 400 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 TPM1P09493 284 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 SYN1P17600 705 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 NOS2P35228 1153 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 KCNJ6P48051 423 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 FXR1P51114 621 aaKnown RBP eCLIP8.58□□□□□ -1.04
COPS3-215ENST00000578317 MFAP3P55082 362 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 JAM2P57087 298 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 LILRA4P59901 499 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 POLR2FP61218 127 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 NOP14P78316 857 aaKnown RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 HTRA4P83105 476 aaPredicted RBP8.58□□□□□ -1.04
COPS3-215ENST00000578317 PTPN21Q16825 1174 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 WDR72Q3MJ13 1102 aa8.58□□□□□ -1.04
COPS3-215ENST00000578317 CNGA4Q8IV77 575 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms