RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.33■■■□□ 2.29
LIMD2-203ENST00000578067 USTQ9Y2C2 406 aa29.33■■■□□ 2.29
LIMD2-203ENST00000578067 POLR3GO15318 223 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-203ENST00000578067 PGK1P00558 417 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 RARAP10276 462 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 TAS2R40P59535 323 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 SIX1Q15475 284 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-203ENST00000578067 CNGA2Q16280 664 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 CYP4A22Q5TCH4 519 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 CXCL17Q6UXB2 119 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 DDX42Q86XP3 938 aaKnown RBP eCLIP29.32■■■□□ 2.28
LIMD2-203ENST00000578067 LRRC52Q8N7C0 313 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 C18orf25Q96B23 403 aaPredicted RBP29.32■■■□□ 2.28
LIMD2-203ENST00000578067 PCYOX1Q9UHG3 505 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 KIAA1257Q9ULG3 409 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 MICAL2O94851 1124 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 ECHS1P30084 290 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 NBPF20Q3BBV1 942 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 SGO2Q562F6 1265 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 GLRA4Q5JXX5 417 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 ZBTB9Q96C00 473 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 C18orf8Q96DM3 657 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 FAM114A2Q9NRY5 505 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 GTF2IRD1Q9UHL9 959 aa29.32■■■□□ 2.28
LIMD2-203ENST00000578067 UBQLN1Q9UMX0 589 aaKnown RBP29.32■■■□□ 2.28
LIMD2-203ENST00000578067 SEPT4O43236 478 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 DAPK3O43293 454 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 HMGCRP04035 888 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 PRKCZQ05513 592 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 TRIM51Q9BSJ1 452 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 NT5C1AQ9BXI3 368 aa29.31■■■□□ 2.28
LIMD2-203ENST00000578067 GPBP1L1Q9HC44 474 aaPredicted RBP29.31■■■□□ 2.28
LIMD2-203ENST00000578067 O00370 1275 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 PPEF2O14830 753 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 RARBP10826 455 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 KATNAL2Q8IYT4 538 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 TSEN2Q8NCE0 465 aaKnown RBP29.3■■■□□ 2.28
LIMD2-203ENST00000578067 MAIP1Q8WWC4 291 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 RUNDC3BQ96NL0 473 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 TSPAN18Q96SJ8 248 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 GOLGA6BA6NDN3 693 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 PTGIRP43119 386 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 SSR1P43307 286 aaKnown RBP29.3■■■□□ 2.28
LIMD2-203ENST00000578067 NKX3-2P78367 333 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 JAMLQ86YT9 394 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 MREGQ8N565 214 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 C12orf50Q8NA57 414 aaPredicted RBP29.3■■■□□ 2.28
LIMD2-203ENST00000578067 FAM71BQ8TC56 605 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 ERP44Q9BS26 406 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 PARP2Q9UGN5 583 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 RASAL2Q9UJF2 1139 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 SNX9Q9Y5X1 595 aa29.3■■■□□ 2.28
LIMD2-203ENST00000578067 MRPS6P82932 125 aaKnown RBP29.29■■■□□ 2.28
LIMD2-203ENST00000578067 ZNF252P-AS1Q0IIN9 211 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 TRIM32Q13049 653 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 PIGHQ14442 188 aaPredicted RBP29.29■■■□□ 2.28
LIMD2-203ENST00000578067 XKR4Q5GH76 650 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 C9orf57Q5W0N0 161 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 TTC27Q6P3X3 843 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 CCDC137Q6PK04 289 aaKnown RBP29.29■■■□□ 2.28
LIMD2-203ENST00000578067 WDR35Q9P2L0 1181 aa29.29■■■□□ 2.28
LIMD2-203ENST00000578067 SMIM28A0A1B0GU29 152 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 M0QYV0 167 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 M0QZ92 97 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 CD4P01730 458 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 KCNE1P15382 129 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 ATF7P17544 494 aaPredicted RBP29.28■■■□□ 2.28
LIMD2-203ENST00000578067 COILP38432 576 aaPredicted RBP29.28■■■□□ 2.28
LIMD2-203ENST00000578067 GSCP56915 257 aaPredicted RBP29.28■■■□□ 2.28
LIMD2-203ENST00000578067 CACNB2Q08289 660 aaPredicted RBP29.28■■■□□ 2.28
LIMD2-203ENST00000578067 ALS2CLQ60I27 953 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 DUPD1Q68J44 220 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 FAM228AQ86W67 206 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 CPXM1Q96SM3 734 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 DPH5Q9H2P9 285 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 RNF39Q9H2S5 420 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 KLK14Q9P0G3 267 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 TRIP11Q15643 1979 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 SIGLEC16A6NMB1 481 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 GPD2P43304 727 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 PSMC1P62191 440 aaKnown RBP29.28■■■□□ 2.28
LIMD2-203ENST00000578067 OGDHQ02218 1023 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 LRRC19Q9H756 370 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 TJP2Q9UDY2 1190 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 IPPQ9Y573 584 aa29.28■■■□□ 2.28
LIMD2-203ENST00000578067 AGPSO00116 658 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 KIF3CO14782 793 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 XPOTO43592 962 aaKnown RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 SYF2O95926 243 aaKnown RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 GGCXP38435 758 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 FNTAP49354 379 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 NOGQ13253 232 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 GDF6Q6KF10 455 aaPredicted RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 RSPH3Q86UC2 560 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 NIPA2Q8N8Q9 360 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 EXD1Q8NHP7 514 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 MRPL45Q9BRJ2 306 aaKnown RBP29.27■■■□□ 2.28
LIMD2-203ENST00000578067 NEUROG2Q9H2A3 272 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 SYNCQ9H7C4 482 aa29.27■■■□□ 2.28
LIMD2-203ENST00000578067 RNF19AQ9NV58 838 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms