RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ZNF699Q32M78 642 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 WDR72Q3MJ13 1102 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 OTOP3Q7RTS5 596 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 ATAD1Q8NBU5 361 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 KBTBD7Q8WVZ9 684 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 ACSF2Q96CM8 615 aaPredicted RBP23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 FAM122AQ96E09 287 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 MMS19Q96T76 1030 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 ACBD6Q9BR61 282 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 NUP62CLQ9H1M0 184 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 CRISPLD1Q9H336 500 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 VRTNQ9H8Y1 702 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 CTNND2Q9UQB3 1225 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 YIPF1Q9Y548 306 aa23.78■■□□□ 1.4
SMARCD2-206ENST00000577990 BICDL2A1A5D9 508 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 CLSTN1O94985 981 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 WARSP23381 471 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 PCSK1P29120 753 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 MCCD1P59942 119 aaPredicted RBP23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 TWF1Q12792 350 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 SMARCB1Q12824 385 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 DUSP4Q13115 394 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 FOXR2Q6PJQ5 311 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 TRIM67Q6ZTA4 783 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 LRRTM3Q86VH5 581 aa23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 C2orf15Q8WU43 125 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-206ENST00000577990 FSHRP23945 695 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 ACAT1P24752 427 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 GTF2H1P32780 548 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 PIK3CAP42336 1068 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 GCLMP48507 274 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 NTHL1P78549 312 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 PPP3CAQ08209 521 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 PAK1Q13153 545 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 PLD1Q13393 1074 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 INTS6LQ5JSJ4 861 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 TTI2Q6NXR4 508 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 GET4Q7L5D6 327 aaPredicted RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 ZDHHC14Q8IZN3 488 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 ELMOD1Q8N336 334 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 PLCD3Q8N3E9 789 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 CEP63Q96MT8 703 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 DUSP9Q99956 384 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 MMRN2Q9H8L6 949 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 HCFC1R1Q9NWW0 138 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 DNMT3BQ9UBC3 853 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 HSFX1Q9UBD0 423 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 NXF1Q9UBU9 619 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 SLC27A5Q9Y2P5 690 aa23.76■■□□□ 1.39
SMARCD2-206ENST00000577990 TMEM221A6NGB7 291 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 M0R296 226 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 HCRTO43612 131 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 TACC1O75410 805 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 HLA-DRAP01903 254 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 FAM163BP0C2L3 166 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 PTPN21Q16825 1174 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 SGSM1Q2NKQ1 1148 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 PABPC1LQ4VXU2 614 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 ZNF667Q5HYK9 610 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 SPPL2BQ8TCT7 592 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 MRPL45Q9BRJ2 306 aaKnown RBP23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 TMEM8AQ9HCN3 771 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 DOCK8Q8NF50 2099 aa23.75■■□□□ 1.39
SMARCD2-206ENST00000577990 NOTCH4Q99466 2003 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 STX10O60499 249 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 N4BP1O75113 896 aaKnown RBP23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 RHOP08100 348 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 PTPN2P17706 415 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 GBP2P32456 591 aaPredicted RBP23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 ALDH1A3P47895 512 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 STX17P56962 302 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 NFE2Q16621 373 aaPredicted RBP23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 TTC9BQ8N6N2 239 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 GPT2Q8TD30 523 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 TAF4BQ92750 862 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 MYADMQ96S97 322 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 PKMYT1Q99640 499 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 SNX25Q9H3E2 840 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 TMLHEQ9NVH6 421 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 ABI2Q9NYB9 513 aaPredicted RBP23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 CEP72Q9P209 647 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 ARMCX3Q9UH62 379 aaPredicted RBP23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 PCDHB5Q9Y5E4 795 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 KMT2EQ8IZD2 1858 aa23.74■■□□□ 1.39
SMARCD2-206ENST00000577990 ASS1P00966 412 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 TUFMP49411 452 aaKnown RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 MXI1P50539 228 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 CDR1P51861 262 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 EPHB3P54753 998 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 DCAF17Q5H9S7 520 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 KRT39Q6A163 491 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 IQCEQ6IPM2 695 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 FILIP1Q7Z7B0 1213 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 TAS1R2Q8TE23 839 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 ZNF512Q96ME7 567 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 SEPT5Q99719 369 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 SYT15Q9BQS2 421 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 CORO1BQ9BR76 489 aa23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 AVENQ9NQS1 362 aaPredicted RBP23.73■■□□□ 1.39
SMARCD2-206ENST00000577990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms