RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 PTPN2P17706 415 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 GTF2H1P32780 548 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 GNL1P36915 607 aaPredicted RBP16.81■□□□□ 0.28
NCBP3-207ENST00000577169 CDH8P55286 799 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 TSPY1Q01534 308 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 TWF1Q12792 350 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 ZNF699Q32M78 642 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 ZNF667Q5HYK9 610 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 TCERG1LQ5VWI1 586 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 MLKLQ8NB16 471 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 TAS1R2Q8TE23 839 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 PI4K2AQ9BTU6 479 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 SRRTQ9BXP5 876 aaKnown RBP16.81■□□□□ 0.28
NCBP3-207ENST00000577169 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 TMEM8AQ9HCN3 771 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.81■□□□□ 0.28
NCBP3-207ENST00000577169 ARMCX3Q9UH62 379 aaPredicted RBP16.81■□□□□ 0.28
NCBP3-207ENST00000577169 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
NCBP3-207ENST00000577169 STX10O60499 249 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 LRRN2O75325 713 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 CLSTN1O94985 981 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 PCSK1P29120 753 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 NLRP12P59046 1061 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 SMARCB1Q12824 385 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 CCDC40Q4G0X9 1142 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 INTS6LQ5JSJ4 861 aaKnown RBP16.8■□□□□ 0.28
NCBP3-207ENST00000577169 KRT39Q6A163 491 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 SPOPLQ6IQ16 392 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 FRMD5Q7Z6J6 570 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 RNF135Q8IUD6 432 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 OR6B3Q8NGW1 331 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 TAF4BQ92750 862 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 KHSRPQ92945 711 aaKnown RBP eCLIP16.8■□□□□ 0.281e-6■■□□□ 14.2
NCBP3-207ENST00000577169 ZNF512Q96ME7 567 aaPredicted RBP16.8■□□□□ 0.28
NCBP3-207ENST00000577169 MED15Q96RN5 788 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 METTL14Q9HCE5 456 aaKnown RBP16.8■□□□□ 0.28
NCBP3-207ENST00000577169 CEP72Q9P209 647 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 USTQ9Y2C2 406 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 NME7Q9Y5B8 376 aa16.8■□□□□ 0.28
NCBP3-207ENST00000577169 MYBPHLA2RUH7 354 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 SOAT2O75908 522 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 ASS1P00966 412 aaKnown RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 FSHRP23945 695 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 ALDH1A3P47895 512 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 TUFMP49411 452 aaKnown RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 DCAF17Q5H9S7 520 aaPredicted RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 FAM171BQ6P995 826 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 OTOP3Q7RTS5 596 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 SPPL2BQ8TCT7 592 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 C2orf15Q8WU43 125 aaKnown RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 SEMA4DQ92854 862 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 ACSF2Q96CM8 615 aaPredicted RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 MYADMQ96S97 322 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 ABI2Q9NYB9 513 aaPredicted RBP16.79■□□□□ 0.28
NCBP3-207ENST00000577169 HSFX1Q9UBD0 423 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 LIMD1Q9UGP4 676 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 CDH9Q9ULB4 789 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 YIPF1Q9Y548 306 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 PCDHB5Q9Y5E4 795 aa16.79■□□□□ 0.28
NCBP3-207ENST00000577169 RHOP08100 348 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 HAPLN1P10915 354 aaPredicted RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 GBP2P32456 591 aaPredicted RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 EPHB3P54753 998 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 PSMC1P62191 440 aaKnown RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 NFE2Q16621 373 aaPredicted RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CCDC142Q17RM4 750 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CBWD6Q4V339 395 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CBWD3Q5JTY5 395 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CBWD5Q5RIA9 395 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 SCARA5Q6ZMJ2 495 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 ZDHHC14Q8IZN3 488 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 HS6ST3Q8IZP7 471 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 ELMOD1Q8N336 334 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 TDRD5Q8NAT2 981 aaKnown RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 ITFG1Q8TB96 612 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 SLC35C1Q96A29 364 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CORO1BQ9BR76 489 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 SMYD3Q9H7B4 428 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
NCBP3-207ENST00000577169 CRTAC1Q9NQ79 661 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 RAB20Q9NX57 234 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 UNC80Q8N2C7 3258 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 DENND4AQ7Z401 1863 aa16.78■□□□□ 0.28
NCBP3-207ENST00000577169 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.28
NCBP3-207ENST00000577169 SPTBN5Q9NRC6 3674 aaKnown RBP16.77■□□□□ 0.28
NCBP3-207ENST00000577169 A8MXQ7 604 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms