RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SLC30A5Q8TAD4 765 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 LPIN2Q92539 896 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 SNX19Q92543 992 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 ANKS1AQ92625 1134 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 TOR3AQ9H497 397 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 CASS4Q9NQ75 786 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 CNNM1Q9NRU3 951 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 KCTD5Q9NXV2 234 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.64□□□□□ -1.35
NUP88-213ENST00000576862 HESX1Q9UBX0 185 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 PACSIN3Q9UKS6 424 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 DMRT1Q9Y5R6 373 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 SALL3Q9BXA9 1300 aa6.64□□□□□ -1.35
NUP88-213ENST00000576862 A0A087X1B8 175 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 TPP1O14773 563 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 DCLK1O15075 740 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 ADRA1BP35368 520 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 AVPR1BP47901 424 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 NPTX2P47972 431 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 PREPLQ4J6C6 727 aaPredicted RBP6.63□□□□□ -1.35
NUP88-213ENST00000576862 SPATA31A3Q5VYP0 1347 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 VWA1Q6PCB0 445 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 APOA5Q6Q788 366 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 Q6ZNX1 250 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 FAM156AQ8NDB6 213 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 SUPT20HQ8NEM7 779 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 GPR150Q8NGU9 434 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 AGAP2Q99490 1192 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 AIFM2Q9BRQ8 373 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 SPATA5L1Q9BVQ7 753 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 FAM204AQ9H8W3 233 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 PLEKHM1Q9Y4G2 1056 aa6.63□□□□□ -1.35
NUP88-213ENST00000576862 USP19O94966 1318 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 FRMPD2Q68DX3 1309 aaPredicted RBP6.62□□□□□ -1.35
NUP88-213ENST00000576862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 MYO1FO00160 1098 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 PROM1O43490 865 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 ESRRBO95718 433 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 HRGP04196 525 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 GRPP07492 148 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 PPP3CBP16298 524 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 TYRP1P17643 537 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 NDUFV1P49821 464 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 HNRNPMP52272 730 aaKnown RBP eCLIP6.62□□□□□ -1.35
NUP88-213ENST00000576862 HMGA2P52926 109 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 TSHZ1Q6ZSZ6 1077 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 KBTBD7Q8WVZ9 684 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 CAVIN3Q969G5 261 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 SLC46A1Q96NT5 459 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 HEPHQ9BQS7 1158 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 DPH1Q9BZG8 443 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 RAD54BQ9Y620 910 aa6.62□□□□□ -1.35
NUP88-213ENST00000576862 WDR33Q9C0J8 1336 aaKnown RBP6.61□□□□□ -1.35
NUP88-213ENST00000576862 TBX3O15119 743 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 ZBED1O96006 694 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 GCLCP48506 637 aaPredicted RBP6.61□□□□□ -1.35
NUP88-213ENST00000576862 ZNF134P52741 427 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 MPP3Q13368 585 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 SRGAP1Q7Z6B7 1085 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 FAM109AQ8N4B1 249 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 TIFAQ96CG3 184 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 OSBPL9Q96SU4 736 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 BHMT2Q9H2M3 363 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
NUP88-213ENST00000576862 PRDM11Q9NQV5 511 aa6.61□□□□□ -1.35
NUP88-213ENST00000576862 A0A0B4J269 797 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 CFAP69A5D8W1 941 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 F5H697 171 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 SOAT2O75908 522 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 THP07101 528 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 EN2P19622 333 aaPredicted RBP6.6□□□□□ -1.35
NUP88-213ENST00000576862 SLC11A2P49281 568 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 UCP3P55916 312 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 TUBB3Q13509 450 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 LONRF3Q496Y0 759 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 KIAA0895LQ68EN5 471 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 MAML1Q92585 1016 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 AMBRA1Q9C0C7 1298 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 TTYH3Q9C0H2 523 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 SMURF2Q9HAU4 748 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 XPR1Q9UBH6 696 aa6.6□□□□□ -1.35
NUP88-213ENST00000576862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.6□□□□□ -1.35
NUP88-213ENST00000576862 BTN3A1O00481 513 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 YY2O15391 372 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 FRS3O43559 492 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 RHOBTB3O94955 611 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 RHCEP18577 417 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 ITGALP20701 1170 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 SLC7A1P30825 629 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 PLA2G5P39877 138 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 RHDQ02161 417 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 CTBP1Q13363 440 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 AMOTQ4VCS5 1084 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 RBM20Q5T481 1227 aaKnown RBP6.59□□□□□ -1.35
NUP88-213ENST00000576862 VPS53Q5VIR6 699 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 RNF220Q5VTB9 566 aa6.59□□□□□ -1.35
NUP88-213ENST00000576862 TMEM108Q6UXF1 575 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms