RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ASCC2Q9H1I8 757 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 EURLQ9NYK6 297 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ZWINTO95229 277 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 GPX6P59796 221 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 OCRLQ01968 901 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 Q4G0T1 1027 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 FNBP1LQ5T0N5 605 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 PLA2G4FQ68DD2 849 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SATL1Q86VE3 508 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 SLC26A7Q8TE54 656 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 ITFG2Q969R8 447 aa15.28■□□□□ 0.04
SCARF1-209ENST00000576012 LARSQ9P2J5 1176 aaKnown RBP15.28■□□□□ 0.04
SCARF1-209ENST00000576012 CYB561D2O14569 222 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 MAGEB2O15479 319 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 PFDN1O60925 122 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 MUTP22033 750 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 ATXN3P54252 364 aaPredicted RBP15.27■□□□□ 0.04
SCARF1-209ENST00000576012 BASP1P80723 227 aaKnown RBP15.27■□□□□ 0.04
SCARF1-209ENST00000576012 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 UBAP2LQ14157 1087 aaKnown RBP15.27■□□□□ 0.04
SCARF1-209ENST00000576012 CENPUQ71F23 418 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 TRIM74Q86UV6 250 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 TRIM73Q86UV7 250 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 PTCD3Q96EY7 689 aaKnown RBP15.27■□□□□ 0.04
SCARF1-209ENST00000576012 IFT43Q96FT9 208 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 GALNT8Q9NY28 637 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 STX18Q9P2W9 335 aaKnown RBP15.27■□□□□ 0.04
SCARF1-209ENST00000576012 IKBKGQ9Y6K9 419 aa15.27■□□□□ 0.04
SCARF1-209ENST00000576012 TCRBV7S3A2A0A539 114 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 ATP2A1O14983 1001 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 CIB2O75838 187 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 MAP3K6O95382 1288 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 NDUFB10O96000 172 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 HARSP12081 509 aaKnown RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 GLRA2P23416 452 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 DSG1Q02413 1049 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 CCNG2Q16589 344 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 HIF1AQ16665 826 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 CLEC16AQ2KHT3 1053 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 FBXO36Q8NEA4 188 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 SHC3Q92529 594 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 OPTNQ96CV9 577 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 IQCGQ9H095 443 aaKnown RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 IGKV6D-41A0A0C4DH26 115 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 MYOCOSA0A1B0GUC4 107 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 DCAF8L1A6NGE4 600 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 DNALI1O14645 258 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 TCEA3O75764 348 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 ADRA2BP18089 450 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 DSG3P32926 999 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 PRELPP51888 382 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 GEMIN4P57678 1058 aaKnown RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 YWHAGP61981 247 aaKnown RBP eCLIP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 USP46P62068 366 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 SLC25A3Q00325 362 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 HELQQ8TDG4 1101 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 MORC4Q8TE76 937 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 OXNAD1Q96HP4 312 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-209ENST00000576012 SPATA16Q9BXB7 569 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 ZWILCHQ9H900 591 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 NARFQ9UHQ1 456 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 ACTL7BQ9Y614 415 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 IVNS1ABPQ9Y6Y0 642 aa15.27■□□□□ 0.03
SCARF1-209ENST00000576012 F8VP50 259 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 AVILO75366 819 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 TOP3BO95985 862 aaKnown RBP15.26■□□□□ 0.03
SCARF1-209ENST00000576012 GSTA2P09210 222 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 KLRC2P26717 231 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 MAN1A1P33908 653 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 TRAPPC3LQ5T215 181 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 SCUBE1Q8IWY4 988 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 RHOT1Q8IXI2 618 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 MTBPQ96DY7 904 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 PANX3Q96QZ0 392 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 RAB20Q9NX57 234 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
SCARF1-209ENST00000576012 DDTLA6NHG4 134 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-209ENST00000576012 ATP6V1B1P15313 513 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 INHBCP55103 352 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 GDF10P55107 478 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 TMPRSS15P98073 1019 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 CDK16Q00536 496 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 KRT39Q6A163 491 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 SV2AQ7L0J3 742 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 CERS5Q8N5B7 392 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 CCDC110Q8TBZ0 833 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 ECSITQ9BQ95 431 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 KCNK13Q9HB14 408 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 SAR1AQ9NR31 198 aa15.26■□□□□ 0.03
SCARF1-209ENST00000576012 IRS2Q9Y4H2 1338 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 ECE2O60344 883 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 SERPINB6P35237 376 aa15.25■□□□□ 0.03
SCARF1-209ENST00000576012 CDC16Q13042 620 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms