RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 PDGFRBP09619 1106 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 OR4Q2P0C623 313 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 CD58P19256 250 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 TRIM21P19474 475 aaKnown RBP14.93□□□□□ -0.02
RPAIN-217ENST00000575711 FANCCQ00597 558 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 GCNT1Q02742 428 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 SMARCB1Q12824 385 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 SKIV2LQ15477 1246 aaKnown RBP14.93□□□□□ -0.02
RPAIN-217ENST00000575711 TPGS2Q68CL5 300 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 LLGL2Q6P1M3 1020 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 UNC93AQ86WB7 457 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 ARHGEF19Q8IW93 802 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 SLC22A17Q8WUG5 538 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 PPM1EQ8WY54 764 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 CASP10Q92851 521 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 TNIP3Q96KP6 325 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 TMEM209Q96SK2 561 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 ARID3AQ99856 593 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 SYT15Q9BQS2 421 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 UBE2TQ9NPD8 197 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-217ENST00000575711 APEX2Q9UBZ4 518 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 DPP7Q9UHL4 492 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 BARX2Q9UMQ3 279 aaPredicted RBP14.93□□□□□ -0.02
RPAIN-217ENST00000575711 TSC2P49815 1807 aa14.93□□□□□ -0.02
RPAIN-217ENST00000575711 HCRTO43612 131 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 EPCAMP16422 314 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 ELF1P32519 619 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 NDST1P52848 882 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 PSMC1P62191 440 aaKnown RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 KCNMA1Q12791 1236 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 GPR17Q13304 367 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 MAPRE1Q15691 268 aaKnown RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 SLC39A12Q504Y0 691 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 PHLDB3Q6NSJ2 640 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 LILRA6Q6PI73 481 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 EP400NLQ6ZTU2 488 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 MAFAQ8NHW3 353 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 ZNF461Q8TAF7 563 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 PCMTD1Q96MG8 357 aaPredicted RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 PGLYRP2Q96PD5 576 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 LSM14BQ9BX40 385 aaKnown RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 RTN4Q9NQC3 1192 aaKnown RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 CLDND1Q9NY35 253 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 AFF4Q9UHB7 1163 aaKnown RBP14.92□□□□□ -0.02
RPAIN-217ENST00000575711 FBXW11Q9UKB1 542 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 NME7Q9Y5B8 376 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 MYO9BQ13459 2157 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 ATG2AQ2TAZ0 1938 aa14.92□□□□□ -0.02
RPAIN-217ENST00000575711 A0A1B0GTH6 734 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 LINC01565O15544 149 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 CILPO75339 1184 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 ABLIM3O94929 683 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 ATF2P15336 505 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 MFAP3P55082 362 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 UBASH3AP57075 661 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 ADAM15Q13444 863 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 KCNC3Q14003 757 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 SYCP1Q15431 976 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 NFE2Q16621 373 aaPredicted RBP14.91□□□□□ -0.02
RPAIN-217ENST00000575711 LIN9Q5TKA1 542 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 TMEM184AQ6ZMB5 413 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 LRRTM3Q86VH5 581 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 B3GALNT2Q8NCR0 500 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 KREMEN2Q8NCW0 462 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 VN1R2Q8NFZ6 395 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 C2orf15Q8WU43 125 aaKnown RBP14.91□□□□□ -0.02
RPAIN-217ENST00000575711 HDAC7Q8WUI4 952 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 PABPC5Q96DU9 382 aaKnown RBP14.91□□□□□ -0.02
RPAIN-217ENST00000575711 NT5C1AQ9BXI3 368 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 DPEP3Q9H4B8 488 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 PLEKHA4Q9H4M7 779 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 SIX2Q9NPC8 291 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 MAN1C1Q9NR34 630 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 DZANK1Q9NVP4 752 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 GTF3C4Q9UKN8 822 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 MAFFQ9ULX9 164 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 TRANK1O15050 2925 aa14.91□□□□□ -0.02
RPAIN-217ENST00000575711 MYBPHLA2RUH7 354 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 MTMR11A4FU01 709 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 PRRG1O14668 218 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 TEX33O43247 280 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 ATP2C2O75185 946 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 GLP2RO95838 553 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 TPM3P06753 285 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 PTPN1P18031 435 aaKnown RBP14.9□□□□□ -0.02
RPAIN-217ENST00000575711 RFX1P22670 979 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 RBM10P98175 930 aaKnown RBP14.9□□□□□ -0.02
RPAIN-217ENST00000575711 APBA1Q02410 837 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 ADCY1Q08828 1119 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 COL19A1Q14993 1142 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 CTC1Q2NKJ3 1217 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 ZNF394Q53GI3 561 aa14.9□□□□□ -0.02
RPAIN-217ENST00000575711 KLHDC7AQ5VTJ3 777 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms