RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC40-214ENST00000575431 SMRP1Q8NCR6 262 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 OR6B3Q8NGW1 331 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 OR10T2Q8NGX3 314 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 KBTBD7Q8WVZ9 684 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 TNIP3Q96KP6 325 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 FAM81BQ96LP2 452 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 ASB2Q96Q27 587 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 NIF3L1Q9GZT8 377 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 S1PR5Q9H228 398 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 PLXNA3P51805 1871 aa10.23□□□□□ -0.77
CCDC40-214ENST00000575431 CCDC195A0A1B0GUA6 201 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 A8MXQ7 604 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 KCNJ18B7U540 433 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 MBTPS2O43462 519 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 LRG1P02750 347 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 SPATA31D3P0C874 917 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 YWHAEP62258 255 aaKnown RBP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 RBM10P98175 930 aaKnown RBP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 KCNJ12Q14500 433 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 SCARA3Q6AZY7 606 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PTCRAQ6ISU1 281 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 C4orf50Q6ZRC1 276 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 SPATA31D4Q6ZUB0 917 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 ELMOD1Q8N336 334 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 JAKMIP2Q96AA8 810 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 FUBP3Q96I24 572 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 NT5C1BQ96P26 610 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 RTP3Q9BQQ7 232 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 MRPL45Q9BRJ2 306 aaKnown RBP10.22□□□□□ -0.77
CCDC40-214ENST00000575431 TUBGCP2Q9BSJ2 902 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PRKD2Q9BZL6 878 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 DNAJC25Q9H1X3 360 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 CYP4F11Q9HBI6 524 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PRKAG3Q9UGI9 489 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 PCDHB5Q9Y5E4 795 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 MYO7AQ13402 2215 aa10.22□□□□□ -0.77
CCDC40-214ENST00000575431 SYCE3A1L190 88 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 MTMR11A4FU01 709 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 ASPAP45381 313 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 ALDH1A3P47895 512 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 ZNF165P49910 485 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 RPL10AP62906 217 aaKnown RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CBX2Q14781 532 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SMAD2Q15796 467 aaKnown RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CFAP221Q4G0U5 840 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 ANO6Q4KMQ2 910 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 VWA3BQ502W6 1294 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 TCP11X2Q5H9J9 407 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 TJAP1Q5JTD0 557 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CDKAL1Q5VV42 579 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 FAM171BQ6P995 826 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 GBP6Q6ZN66 633 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 C11orf57Q6ZUT1 292 aaPredicted RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 OSTM1Q86WC4 334 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CRYBG2Q8N1P7 616 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 LEMD2Q8NC56 503 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SLC7A14Q8TBB6 771 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 MYCBPAPQ8TBZ2 947 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SUSD6Q92537 303 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SEMA4DQ92854 862 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CEP295NLQ96MC4 621 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SYT15Q9BQS2 421 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 PI4K2AQ9BTU6 479 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 FUCA2Q9BTY2 467 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 NDST4Q9H3R1 872 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 SAMSN1Q9NSI8 373 aaKnown RBP10.21□□□□□ -0.77
CCDC40-214ENST00000575431 POLIQ9UNA4 740 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 ASB3Q9Y575 518 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 INSL5Q9Y5Q6 135 aa10.21□□□□□ -0.77
CCDC40-214ENST00000575431 CHD9Q3L8U1 2897 aa10.21□□□□□ -0.78
CCDC40-214ENST00000575431 BECN2A8MW95 431 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 SEC24AO95486 1093 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 PDGFRBP09619 1106 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 OR4Q2P0C623 313 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 HAPLN1P10915 354 aaPredicted RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 BMP1P13497 986 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 PTPN1P18031 435 aaKnown RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 CDK11BP21127 795 aaKnown RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ACAT1P24752 427 aaKnown RBP10.2□□□□□ -0.78
CCDC40-214ENST00000575431 LMO2P25791 158 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 MAGEA11P43364 429 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 EPHB3P54753 998 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 TPM4P67936 248 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 GCNT1Q02742 428 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 TFF2Q03403 129 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 DUSP4Q13115 394 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 CUL2Q13617 745 aa10.2□□□□□ -0.78
CCDC40-214ENST00000575431 ZSCAN23Q3MJ62 389 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms