RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 LRRC6Q86X45 466 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 CCDC28AQ8IWP9 274 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 RIN3Q8TB24 985 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 PRR7Q8TB68 274 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 ESR2Q92731 530 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 MS4A14Q96JA4 679 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 YME1L1Q96TA2 773 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 MIPEPQ99797 713 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 HERC2P3Q9BVR0 1158 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 DNAI2Q9GZS0 605 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 NEUROG2Q9H2A3 272 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 SEPT3Q9UH03 358 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 SERTAD1Q9UHV2 236 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 LZTS1Q9Y250 596 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 ATP11BQ9Y2G3 1177 aa8.36□□□□□ -1.07
TOM1L1-220ENST00000575333 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ATP8B3O60423 1300 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 FRMPD4Q14CM0 1322 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 BTNL10A8MVZ5 291 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 RBAK-RBAKDNI3L0D1 243 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 POLR2DO15514 142 aaKnown RBP8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 JRKO75564 520 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 DDHD2O94830 711 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 C8BP07358 591 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 KRT5P13647 590 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ZNF23P17027 643 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 PRDX6P30041 224 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ADCY8P40145 1251 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 PIK3CAP42336 1068 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ACTR3P61158 418 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 STX1BP61266 288 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 FOLH1Q04609 750 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 THOC5Q13769 683 aaKnown RBP8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 SQLEQ14534 574 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 PSMD6Q15008 389 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 UBE3CQ15386 1083 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 SF3B4Q15427 424 aaKnown RBP eCLIP8.35□□□□□ -1.074e-8■■□□□ 14.4
TOM1L1-220ENST00000575333 TRIM16LQ309B1 348 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 AGAP7PQ5VUJ5 663 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 KRT77Q7Z794 578 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 C11orf96Q7Z7L8 435 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 AFAP1L2Q8N4X5 818 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 METTL25Q8N6Q8 603 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ARL6IP6Q8N6S5 226 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 CCDC89Q8N998 374 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ICA1LQ8NDH6 482 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 CATSPER1Q8NEC5 780 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 DTX3LQ8TDB6 740 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM172AQ8WUF8 416 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 TRUB1Q8WWH5 349 aaKnown RBP8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 JADE3Q92613 823 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 METTL2AQ96IZ6 378 aaKnown RBP8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 MTMR9Q96QG7 549 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 CCDC77Q9BR77 488 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 CDH19Q9H159 772 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 RAB26Q9ULW5 256 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 TFR2Q9UP52 801 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 CTNND2Q9UQB3 1225 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ERGIC3Q9Y282 383 aa8.35□□□□□ -1.07
TOM1L1-220ENST00000575333 ADGRA3Q8IWK6 1321 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 TEX51A0A1B0GUA7 166 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM196BA6NMK8 535 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 MIF4GDA9UHW6 222 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 FOXN1O15353 648 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 DAPK3O43293 454 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 KPNA6O60684 536 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 ZBTB11O95625 1053 aaPredicted RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 BTF3P20290 206 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 MUTP22033 750 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 WEE1P30291 646 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 PTGS2P35354 604 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 SLC18A1P54219 525 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 STX17P56962 302 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 SRP54P61011 504 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 IFI35P80217 286 aaPredicted RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 GBE1Q04446 702 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 CETN1Q12798 172 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 GNA13Q14344 377 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 MOGQ16653 247 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 DCAF6Q58WW2 860 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 HP1BP3Q5SSJ5 553 aaPredicted RBP8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 TRAPPC3LQ5T215 181 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 NEK5Q6P3R8 708 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 FAM47EQ6ZV65 393 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 LPCAT2Q7L5N7 544 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 CLNKQ7Z7G1 428 aa8.34□□□□□ -1.07
TOM1L1-220ENST00000575333 VPS37DQ86XT2 251 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms