RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 ARL2BPQ9Y2Y0 163 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 SOWAHBA6NEL2 793 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 C3orf70A6NLC5 250 aaPredicted RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 OGTO15294 1046 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 ALOX15BO15296 676 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 PECAM1P16284 738 aaPredicted RBP9.44□□□□□ -0.9
NCBP3-204ENST00000574911 TAC1P20366 129 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 FOXN2P32314 431 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 NCALDP61601 193 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 GPS1Q13098 491 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 TMED2Q15363 201 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 WLSQ5T9L3 541 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 LBX2Q6XYB7 198 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 TRABD2AQ86V40 505 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 ERICH1Q86X53 443 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 UBN1Q9NPG3 1134 aa9.44□□□□□ -0.9
NCBP3-204ENST00000574911 EXOC1LA0A1B0GW35 172 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 FAM47DPA6NHR8 397 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 RASA4BC9J798 803 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 NDC80O14777 642 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PRPF4O43172 522 aaKnown RBP eCLIP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 RASA4O43374 803 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ASPAP45381 313 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 SLC18A1P54219 525 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 BNIP1Q12981 228 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 NEDD9Q14511 834 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 MTFR1Q15390 333 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PREPLQ4J6C6 727 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ZFYVE27Q5T4F4 411 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 DENND1BQ6P3S1 775 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 POLNQ7Z5Q5 900 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 GBP7Q8N8V2 638 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 SLC35B2Q8TB61 432 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 DENND1AQ8TEH3 1009 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 SEPT1Q8WYJ6 367 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 TCHPQ9BT92 498 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PCDH9Q9HC56 1237 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 MAGEB2O15479 319 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ATP6V1G2O95670 118 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ASMTLO95671 621 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PRKCBP05771 671 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 HOXC6P09630 235 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 WEE2P0C1S8 567 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PROZP22891 400 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 IL9RQ01113 521 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 LAMTOR4Q0VGL1 99 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 TRPC3Q13507 836 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ACVR2BQ13705 512 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 FASTKD3Q14CZ7 662 aaKnown RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 CYP4A22Q5TCH4 519 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 RNF43Q68DV7 783 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 CCDC91Q7Z6B0 441 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 RIOX2Q8IUF8 465 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 CNKSR2Q8WXI2 1034 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ACSF2Q96CM8 615 aaPredicted RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 XYLT2Q9H1B5 865 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 BTBD7Q9P203 1132 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 GGT7Q9UJ14 662 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 EFR3BQ9Y2G0 817 aa9.43□□□□□ -0.9
NCBP3-204ENST00000574911 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 BRCA1P38398 1863 aaKnown RBP9.43□□□□□ -0.9
NCBP3-204ENST00000574911 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 IGKV6-21A0A0C4DH24 114 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 LRRD1A4D1F6 860 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 SIGLEC16A6NMB1 481 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 PEX10O60683 326 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TGFB3P10600 412 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 NQO1P15559 274 aaKnown RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 GSCP56915 257 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 SLC25A11Q02978 314 aaKnown RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 RIPK1Q13546 671 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 RASA2Q15283 850 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TAZQ16635 292 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TREML2Q5T2D2 321 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 METTL7BQ6UX53 244 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ZBTB8OSQ8IWT0 167 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ARFGAP1Q8N6T3 406 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TCP11Q8WWU5 503 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 FAM167AQ96KS9 214 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 FRMD8P1Q9BZ68 369 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 LHX5Q9H2C1 402 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 YY1AP1Q9H869 796 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 RXFP1Q9HBX9 757 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 PTPRHQ9HD43 1115 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 STRIP2Q9ULQ0 834 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 SHOC2Q9UQ13 582 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 FARP1Q9Y4F1 1045 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ZBTB42B2RXF5 422 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 GAS2O43903 313 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms