RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 SMG9Q9H0W8 520 aaKnown RBP12.95□□□□□ -0.34
CTNS-208ENST00000574218 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
CTNS-208ENST00000574218 ANKRD11Q6UB99 2663 aaPredicted RBP12.95□□□□□ -0.34
CTNS-208ENST00000574218 SPINK2P20155 84 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 CSRP1P21291 193 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 AARSP49588 968 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTNS-208ENST00000574218 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTNS-208ENST00000574218 GUCY1B3Q02153 619 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 DMC1Q14565 340 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 PDGFRLQ15198 375 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 ECM1Q16610 540 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 KYAT1Q16773 422 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 UAP1L1Q3KQV9 507 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 TTC38Q5R3I4 469 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 KRT79Q5XKE5 535 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 TRIM68Q6AZZ1 485 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 SYT13Q7L8C5 426 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 CYP2U1Q7Z449 544 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 TTC9BQ8N6N2 239 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 RPLP0P6Q8NHW5 317 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 GIPC2Q8TF65 315 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 MRPS31Q92665 395 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 SLC32A1Q9H598 525 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 ASCC3Q8N3C0 2202 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 SCN1AP35498 2009 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
CTNS-208ENST00000574218 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
CTNS-208ENST00000574218 LNP1A1A4G5 178 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 E9PMD0 336 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 H0YCG3 227 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 ABLIM1O14639 778 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 DCLK1O15075 740 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 JAK2O60674 1132 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 LARGE1O95461 756 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
CTNS-208ENST00000574218 MCL1Q07820 350 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 MAB21L3Q8N8X9 362 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 TTC16Q8NEE8 873 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
CTNS-208ENST00000574218 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 SENP8Q96LD8 212 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 TSPAN18Q96SJ8 248 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 SCNM1Q9BWG6 230 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 SLC46A2Q9BY10 475 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 RPF1Q9H9Y2 349 aaKnown RBP12.93□□□□□ -0.34
CTNS-208ENST00000574218 HPS4Q9NQG7 708 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 TDP1Q9NUW8 608 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 EBF1Q9UH73 591 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 DSEQ9UL01 958 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 SSUH2Q9Y2M2 353 aa12.93□□□□□ -0.34
CTNS-208ENST00000574218 TTC26A0AVF1 554 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 SRRM3A6NNA2 597 aaPredicted RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 SOBPA7XYQ1 873 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 SFI1A8K8P3 1242 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 HOXB3P14651 431 aaPredicted RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 IFNAR2P48551 515 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 DHPSP49366 369 aaPredicted RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 LIG4P49917 911 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 GALK1P51570 392 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 GUCY2FP51841 1108 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 SMARCB1Q12824 385 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 NR1H3Q13133 447 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 ZRSR1Q15695 479 aaKnown RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 ME3Q16798 604 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 RINT1Q6NUQ1 792 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 PKD1L2Q7Z442 2459 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 DAW1Q8N136 415 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 SPPL2BQ8TCT7 592 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 CD101Q93033 1021 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 RUSC1Q9BVN2 902 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 IL21Q9HBE4 155 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 POLR3BQ9NW08 1133 aaPredicted RBP12.92□□□□□ -0.34
CTNS-208ENST00000574218 ANAPC1Q9H1A4 1944 aa12.92□□□□□ -0.34
CTNS-208ENST00000574218 PCNX2A6NKB5 2137 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 TNRC6BQ9UPQ9 1833 aaKnown RBP12.91□□□□□ -0.34
CTNS-208ENST00000574218 LACTBL1A8MY62 500 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
CTNS-208ENST00000574218 PLS3P13797 630 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 ARSAP15289 507 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 ATF6P18850 670 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTNS-208ENST00000574218 TRAPPC10P48553 1259 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 LILRA4P59901 499 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 RAD51AP2Q09MP3 1159 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 LMAN2Q12907 356 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 PDIA5Q14554 519 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 MTF1Q14872 753 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 PMS2CLQ68D20 193 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 KIAA1211LQ6NV74 962 aa12.91□□□□□ -0.34
CTNS-208ENST00000574218 TTC30AQ86WT1 665 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms