RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 MTSS1LQ765P7 747 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 PDZD4Q76G19 769 aaPredicted RBP17.33■□□□□ 0.36
NDE1-205ENST00000572756 DCP1BQ8IZD4 617 aaKnown RBP17.33■□□□□ 0.36
NDE1-205ENST00000572756 ADGRF2Q8IZF7 708 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 ST13P5Q8NFI4 369 aaPredicted RBP17.33■□□□□ 0.36
NDE1-205ENST00000572756 SPPL2BQ8TCT7 592 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 TIGD1Q96MW7 591 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 ASAH2Q9NR71 780 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 MAPK8IP1Q9UQF2 711 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 HCN4Q9Y3Q4 1203 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
NDE1-205ENST00000572756 ARIH1Q9Y4X5 557 aaPredicted RBP17.33■□□□□ 0.36
NDE1-205ENST00000572756 ASB3Q9Y575 518 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 DENND4CQ5VZ89 1909 aa17.33■□□□□ 0.36
NDE1-205ENST00000572756 STAU1O95793 577 aaKnown RBP17.32■□□□□ 0.36
NDE1-205ENST00000572756 SRFP11831 508 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 ATF6P18850 670 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 LHX1P48742 406 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 TUFMP49411 452 aaKnown RBP17.32■□□□□ 0.36
NDE1-205ENST00000572756 MYL7Q01449 175 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 TSPY1Q01534 308 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
NDE1-205ENST00000572756 CYP4A22Q5TCH4 519 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 TDRD10Q5VZ19 366 aaKnown RBP17.32■□□□□ 0.36
NDE1-205ENST00000572756 TMC2Q8TDI7 906 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 MCRS1Q96EZ8 462 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 XYLT2Q9H1B5 865 aa17.32■□□□□ 0.36
NDE1-205ENST00000572756 MAPK13O15264 365 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 HCRTO43612 131 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 C4BPAP04003 597 aaKnown RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 HAPLN1P10915 354 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 FCARP24071 287 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 ACAT1P24752 427 aaKnown RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 CDR1P51861 262 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 AP3M2P53677 418 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 DLG4P78352 724 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 MGAT5BQ3V5L5 792 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 COBLL1Q53SF7 1204 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 C1orf220Q5T0J3 134 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 DNAJB7Q7Z6W7 309 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 ELOA2Q8IYF1 753 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 SMYD4Q8IYR2 804 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 SHKBP1Q8TBC3 707 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 GSDMAQ96QA5 445 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 SEPT5Q99719 369 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 VRTNQ9H8Y1 702 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 ZNF334Q9HCZ1 680 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 SLC2A4RGQ9NR83 387 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 ABI2Q9NYB9 513 aaPredicted RBP17.31■□□□□ 0.36
NDE1-205ENST00000572756 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 OBSL1O75147 1896 aa17.31■□□□□ 0.36
NDE1-205ENST00000572756 GREB1Q4ZG55 1949 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 AKAP3O75969 853 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 FAM163BP0C2L3 166 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 MYL4P12829 197 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
NDE1-205ENST00000572756 NR2F2P24468 414 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 PCSK1P29120 753 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 ATICP31939 592 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 VCPP55072 806 aaKnown RBP17.3■□□□□ 0.36
NDE1-205ENST00000572756 MYL6P60660 151 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 NFE2Q16621 373 aaPredicted RBP17.3■□□□□ 0.36
NDE1-205ENST00000572756 CCDC142Q17RM4 750 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 CEP135Q66GS9 1140 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 FAM171BQ6P995 826 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 SUGP1Q8IWZ8 645 aaKnown RBP17.3■□□□□ 0.36
NDE1-205ENST00000572756 ZSWIM3Q96MP5 696 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 LPIN3Q9BQK8 851 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 KCNH6Q9H252 994 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 ABCB6Q9NP58 842 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 WNT16Q9UBV4 365 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 GTF3C4Q9UKN8 822 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 FRMD4BQ9Y2L6 1034 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 NME7Q9Y5B8 376 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 PCDHA5Q9Y5H7 936 aa17.3■□□□□ 0.36
NDE1-205ENST00000572756 NUP210Q8TEM1 1887 aaPredicted RBP17.3■□□□□ 0.36
NDE1-205ENST00000572756 KRBA1A5PL33 1030 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 GADD45BO75293 160 aaPredicted RBP17.29■□□□□ 0.36
NDE1-205ENST00000572756 TACC1O75410 805 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 ECI2O75521 394 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 VNN1O95497 513 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 CFHP08603 1231 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 GJA1P17302 382 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 NPR3P17342 541 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 LMO2P25791 158 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 MCCD1P59942 119 aaPredicted RBP17.29■□□□□ 0.36
NDE1-205ENST00000572756 TRPC3Q13507 836 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 TEAD2Q15562 447 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 EDRF1Q3B7T1 1238 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 ZACNQ401N2 412 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 FAM78AQ5JUQ0 283 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 ZNF658Q5TYW1 1059 aaPredicted RBP17.29■□□□□ 0.36
NDE1-205ENST00000572756 TANGO2Q6ICL3 276 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 ITIH5Q86UX2 942 aa17.29■□□□□ 0.36
NDE1-205ENST00000572756 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
NDE1-205ENST00000572756 SYAP1Q96A49 352 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms