RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FAM189A1O60320 539 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 AKAP3O75969 853 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 NMT1P30419 496 aaKnown RBP21.51■■□□□ 1.03
CCDC40-206ENST00000572083 TUFMP49411 452 aaKnown RBP21.51■■□□□ 1.03
CCDC40-206ENST00000572083 LIG4P49917 911 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 PLK5Q496M5 336 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 SPATA1Q5VX52 437 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 NAIF1Q69YI7 327 aaPredicted RBP21.51■■□□□ 1.03
CCDC40-206ENST00000572083 JADE1Q6IE81 842 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 ZC3H10Q96K80 434 aaKnown RBP21.51■■□□□ 1.03
CCDC40-206ENST00000572083 PLIN2Q99541 437 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 EDEM2Q9BV94 578 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 RPF1Q9H9Y2 349 aaKnown RBP21.51■■□□□ 1.03
CCDC40-206ENST00000572083 VPS45Q9NRW7 570 aa21.51■■□□□ 1.03
CCDC40-206ENST00000572083 TRDMT1O14717 391 aaKnown RBP21.5■■□□□ 1.03
CCDC40-206ENST00000572083 HNRNPDLO14979 420 aaKnown RBP21.5■■□□□ 1.03
CCDC40-206ENST00000572083 PROS1P07225 676 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 ARSAP15289 507 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 U2AF2P26368 475 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC40-206ENST00000572083 AVPR1AP37288 418 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 MAB21L3Q8N8X9 362 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 RIN3Q8TB24 985 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 ZCWPW1Q9H0M4 648 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 DUSP15Q9H1R2 295 aaPredicted RBP21.5■■□□□ 1.03
CCDC40-206ENST00000572083 FBRSL1Q9HCM7 1045 aaKnown RBP21.5■■□□□ 1.03
CCDC40-206ENST00000572083 KCNG1Q9UIX4 513 aa21.5■■□□□ 1.03
CCDC40-206ENST00000572083 FAM208BQ5VWN6 2430 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 C1QTNF9BB2RNN3 333 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 DCLK1O15075 740 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 NFICP08651 508 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 C1QTNF9P0C862 333 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 SLC12A3P55017 1021 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 NCKAP1LP55160 1127 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 BFSP1Q12934 665 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 C9orf57Q5W0N0 161 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 DTHD1Q6ZMT9 781 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 TMEM150AQ86TG1 271 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 CAMKK1Q8N5S9 505 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 SYT2Q8N9I0 419 aaPredicted RBP21.49■■□□□ 1.03
CCDC40-206ENST00000572083 STKLD1Q8NE28 680 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 USP13Q92995 863 aaPredicted RBP21.49■■□□□ 1.03
CCDC40-206ENST00000572083 PNMA5Q96PV4 448 aa21.49■■□□□ 1.03
CCDC40-206ENST00000572083 LLPHQ9BRT6 129 aaKnown RBP21.49■■□□□ 1.03
CCDC40-206ENST00000572083 OBSL1O75147 1896 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 GIPC1O14908 333 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 OGTO15294 1046 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 CYP11A1P05108 521 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 NOVA1P51513 510 aaKnown RBP21.48■■□□□ 1.03
CCDC40-206ENST00000572083 CREB5Q02930 508 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 ELF2Q15723 593 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 KYAT1Q16773 422 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 FAM184AQ8NB25 1140 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 RPLP0P6Q8NHW5 317 aa21.48■■□□□ 1.03
CCDC40-206ENST00000572083 ABI2Q9NYB9 513 aaPredicted RBP21.48■■□□□ 1.03
CCDC40-206ENST00000572083 LARSQ9P2J5 1176 aaKnown RBP21.48■■□□□ 1.03
CCDC40-206ENST00000572083 BAHCC1Q9P281 2608 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 DENND4CQ5VZ89 1909 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 LAD1O00515 517 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 ADRB2P07550 413 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 PRPHP41219 470 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 TXNDC8Q6A555 127 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 UNQ6494/PRO21346Q6UXR6 183 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 LRRTM3Q86VH5 581 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 MSTO1Q9BUK6 570 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 TDP1Q9NUW8 608 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 LIMCH1Q9UPQ0 1083 aa21.47■■□□□ 1.03
CCDC40-206ENST00000572083 SCN1AP35498 2009 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 ANO9A1A5B4 782 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 C4orf47A7E2U8 309 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 H0YCG3 227 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 K7ENM7 598 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 PIRO00625 290 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 PLA2G4BP0C869 781 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 DRD1P21728 446 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 GALK1P51570 392 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 NLRP12P59046 1061 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 HMGN5P82970 282 aaKnown RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 ZNF252P-AS1Q0IIN9 211 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 TMEM132DQ14C87 1099 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 HYIQ5T013 277 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 CC2D1AQ6P1N0 951 aaPredicted RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 METTL23Q86XA0 190 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 TTC16Q8NEE8 873 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 SPPL2BQ8TCT7 592 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 TSPAN18Q96SJ8 248 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 P2RY13Q9BPV8 354 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 PYM1Q9BRP8 204 aaKnown RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 KIF9Q9HAQ2 790 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 ZMYM5Q9UJ78 669 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 CPSF3Q9UKF6 684 aaKnown RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 DSEQ9UL01 958 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 ZMIZ1Q9ULJ6 1067 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 TBX20Q9UMR3 447 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 MAGED2Q9UNF1 606 aaPredicted RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 ZNF638Q14966 1978 aaKnown RBP21.46■■□□□ 1.03
CCDC40-206ENST00000572083 IGF2RP11717 2491 aa21.46■■□□□ 1.03
CCDC40-206ENST00000572083 CYB561D2O14569 222 aa21.45■■□□□ 1.02
CCDC40-206ENST00000572083 CAVIN2O95810 425 aa21.45■■□□□ 1.02
CCDC40-206ENST00000572083 F11P03951 625 aa21.45■■□□□ 1.02
CCDC40-206ENST00000572083 HAPLN1P10915 354 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms