RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 GET4Q7L5D6 327 aaPredicted RBP14.81□□□□□ -0.04
RPAIN-209ENST00000571558 TAS1R1Q7RTX1 841 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 NELL1Q92832 810 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 COLEC11Q9BWP8 271 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 EPC1Q9H2F5 836 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 ZSCAN32Q9NX65 697 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 IFNKQ9P0W0 207 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 CDV3Q9UKY7 258 aaKnown RBP14.81□□□□□ -0.04
RPAIN-209ENST00000571558 PRG3Q9Y2Y8 225 aaPredicted RBP14.81□□□□□ -0.04
RPAIN-209ENST00000571558 HES2Q9Y543 173 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 IPPQ9Y573 584 aa14.81□□□□□ -0.04
RPAIN-209ENST00000571558 CACNA1IQ9P0X4 2223 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 TTC26A0AVF1 554 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 LRRIQ3A6PVS8 624 aaPredicted RBP14.8□□□□□ -0.04
RPAIN-209ENST00000571558 LGALS16A8MUM7 142 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 NCAM2O15394 837 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 TGM5O43548 720 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 ZMYND10O75800 440 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 CXCL8P10145 99 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 ITGA4P13612 1032 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 FSHRP23945 695 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 OR1G1P47890 313 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 VAMP7P51809 220 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 UBASH3AP57075 661 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 OSTNP61366 133 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 GPC5P78333 572 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 PPP2R3AQ06190 1150 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 SLC10A6Q3KNW5 377 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 USP41Q3LFD5 358 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 VWA3BQ502W6 1294 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 ANKRD20A12PQ8NF67 263 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 XPO4Q9C0E2 1151 aaKnown RBP14.8□□□□□ -0.04
RPAIN-209ENST00000571558 VPS16Q9H269 839 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 NDST4Q9H3R1 872 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 PDE11AQ9HCR9 933 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 CDH7Q9ULB5 785 aa14.8□□□□□ -0.04
RPAIN-209ENST00000571558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.8□□□□□ -0.04
RPAIN-209ENST00000571558 PTPRJQ12913 1337 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 LILRB5O75023 590 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 HNRNPA1P09651 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
RPAIN-209ENST00000571558 KRT13P13646 458 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
RPAIN-209ENST00000571558 ZNF75DP51815 510 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 PPP3CAQ08209 521 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 KCNH2Q12809 1159 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 MLF2Q15773 248 aaPredicted RBP14.79□□□□□ -0.04
RPAIN-209ENST00000571558 SLC44A4Q53GD3 710 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 ALKAL1Q6UXT8 129 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 PALB2Q86YC2 1186 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 CREBRFQ8IUR6 639 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 TRIM6Q9C030 488 aaPredicted RBP14.79□□□□□ -0.04
RPAIN-209ENST00000571558 SNTG2Q9NY99 539 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 DOCK8Q8NF50 2099 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 CHD6Q8TD26 2715 aa14.79□□□□□ -0.04
RPAIN-209ENST00000571558 ARL5CA6NH57 179 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 LACTBL1A8MY62 500 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 TEX33O43247 280 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 IL18RAPO95256 599 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 AFPP02771 609 aaKnown RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 SPATA31D3P0C874 917 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 HOXA9P31269 272 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 PBX1P40424 430 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 RPS9P46781 194 aaKnown RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CSTF1Q05048 431 aaKnown RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 XKR4Q5GH76 650 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 DCAF17Q5H9S7 520 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 SPATA31D4Q6ZUB0 917 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 HACE1Q8IYU2 909 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 ZNF516Q92618 1163 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 FGF14Q92915 247 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CLDN23Q96B33 292 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CCDC127Q96BQ5 260 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 MRFAP1L1Q96HT8 127 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 ACAP3Q96P50 834 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CGRRF1Q99675 332 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CCDC94Q9BW85 323 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 TRIM5Q9C035 493 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 CXCL16Q9H2A7 254 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 RPF1Q9H9Y2 349 aaKnown RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 TOPORSQ9NS56 1045 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
RPAIN-209ENST00000571558 SPTBN2O15020 2390 aa14.78□□□□□ -0.04
RPAIN-209ENST00000571558 FAM170BA6NMN3 283 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 PMM2O15305 246 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 CBFA2T2O43439 604 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 RECQL4O94761 1208 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 ADCY5O95622 1261 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 ADRB1P08588 477 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 AKAP5P24588 427 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 GTF2H1P32780 548 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 SURF1Q15526 300 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 FILIP1LQ4L180 1135 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 CBWD6Q4V339 395 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 CBWD3Q5JTY5 395 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 CBWD5Q5RIA9 395 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 TCERG1LQ5VWI1 586 aa14.77□□□□□ -0.04
RPAIN-209ENST00000571558 PARM1Q6UWI2 310 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms