RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ADAM7Q9H2U9 754 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 SFXN1Q9H9B4 322 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 CYP4F11Q9HBI6 524 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 TMEM8AQ9HCN3 771 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 SAMSN1Q9NSI8 373 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 TMEM30AQ9NV96 361 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 DZANK1Q9NVP4 752 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 DNMT3BQ9UBC3 853 aaKnown RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 ARMCX3Q9UH62 379 aaPredicted RBP7.49□□□□□ -1.21
SMG6-209ENST00000571442 MUC6Q6W4X9 2439 aa7.49□□□□□ -1.21
SMG6-209ENST00000571442 GREB1Q4ZG55 1949 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 BICDL2A1A5D9 508 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 ARHGEF37A1IGU5 675 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 OR6C75A6NL08 312 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 HUS1O60921 280 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 OBSL1O75147 1896 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 TACC1O75410 805 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 HOXB8P17481 243 aaPredicted RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 ATF6P18850 670 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 ATICP31939 592 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 GTF2H1P32780 548 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 CCR2P41597 374 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 FMO5P49326 533 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 AP3M2P53677 418 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 CACNA2D1P54289 1103 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 NOP14P78316 857 aaKnown RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 ZP2Q05996 745 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 TYRO3Q06418 890 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 TWF1Q12792 350 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 MYO1EQ12965 1108 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 CBX2Q14781 532 aaPredicted RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 NCAPHQ15003 741 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 SLC5A9Q2M3M2 681 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 ZNF667Q5HYK9 610 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 INTS6LQ5JSJ4 861 aaKnown RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 PPM1LQ5SGD2 360 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 SDHAF4Q5VUM1 108 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 KRT39Q6A163 491 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 FAM171BQ6P995 826 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 GRASPQ7Z6J2 395 aaPredicted RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 TCEAL8Q8IYN2 117 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 HS6ST3Q8IZP7 471 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 CMASQ8NFW8 434 aaPredicted RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 GPR152Q8TDT2 470 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 HDAC7Q8WUI4 952 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 SMG7Q92540 1137 aaKnown RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 KAT5Q92993 513 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 MYLPFQ96A32 169 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 SYAP1Q96A49 352 aaPredicted RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 CNOT6LQ96LI5 555 aaKnown RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 MMS19Q96T76 1030 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 BCO2Q9BYV7 579 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 PRKD2Q9BZL6 878 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 PLEKHA4Q9H4M7 779 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 RAB20Q9NX57 234 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 CEP72Q9P209 647 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 AFF4Q9UHB7 1163 aaKnown RBP7.48□□□□□ -1.21
SMG6-209ENST00000571442 GTF3C4Q9UKN8 822 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 DSEQ9UL01 958 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 COQ4Q9Y3A0 265 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 YIPF1Q9Y548 306 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 INSL5Q9Y5Q6 135 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 MYO10Q9HD67 2058 aa7.48□□□□□ -1.21
SMG6-209ENST00000571442 DENND4CQ5VZ89 1909 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 FSD2A1L4K1 749 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 C19orf67A6NJJ6 358 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 C2CD4DB7Z1M9 353 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 CLDN5O00501 218 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 MOSPD3O75425 235 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 C1RP00736 705 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 CALCAP01258 141 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 SRGAP2BP0DMP2 458 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 GJA1P17302 382 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 PAX3P23760 479 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 CYP2F1P24903 491 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 GNL1P36915 607 aaPredicted RBP7.47□□□□□ -1.21
SMG6-209ENST00000571442 TNNC1P63316 161 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 MYL7Q01449 175 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ITIH3Q06033 890 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 KCNH2Q12809 1159 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 LRMPQ12912 555 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 MTMR3Q13615 1198 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 SGSM1Q2NKQ1 1148 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 KLHL40Q2TBA0 621 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 MIIPQ5JXC2 388 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 TPGS2Q68CL5 300 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 DPY19L2P1Q6NXN4 242 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 GJB7Q6PEY0 223 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 PAQR9Q6ZVX9 377 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 METTL23Q86XA0 190 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ARHGEF19Q8IW93 802 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 TMEM86AQ8N2M4 240 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 UBR7Q8N806 425 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 FBXL13Q8NEE6 735 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 OR6B3Q8NGW1 331 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ITFG1Q8TB96 612 aa7.47□□□□□ -1.21
SMG6-209ENST00000571442 ENOX1Q8TC92 643 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms